Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 AC023632.3-201ENST00000521633 145 ntBASIC16.74■□□□□ 0.27
GAFA1Q96PS6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 AL031963.3-201ENST00000606441 850 ntBASIC16.74■□□□□ 0.27
GAFA1Q96PS6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAFA1Q96PS6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 KRT8P17-201ENST00000453110 1448 ntBASIC16.73■□□□□ 0.27
GAFA1Q96PS6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAFA1Q96PS6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 KRT8P20-201ENST00000423953 1409 ntBASIC16.72■□□□□ 0.27
GAFA1Q96PS6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 HLA-B-256ENST00000639848 1089 ntBASIC16.72■□□□□ 0.27
GAFA1Q96PS6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAFA1Q96PS6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 HLA-G-202ENST00000376815 851 ntBASIC16.71■□□□□ 0.27
GAFA1Q96PS6 HLA-G-203ENST00000376818 1127 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms