Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 TMEM179-206ENST00000616017 1645 ntBASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRUB1Q8WWH5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
TRUB1Q8WWH5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRUB1Q8WWH5 AL049812.1-201ENST00000432563 2267 ntBASIC18.39■□□□□ 0.54
TRUB1Q8WWH5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.39■□□□□ 0.54
TRUB1Q8WWH5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB1Q8WWH5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 RARRES2P11-201ENST00000635158 484 ntBASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB1Q8WWH5 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRUB1Q8WWH5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 AL356441.2-201ENST00000443009 864 ntBASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 AC131281.2-201ENST00000520478 145 ntBASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms