Protein–RNA interactions for Protein: Q5JSP0

FGD3, FYVE, RhoGEF and PH domain-containing protein 3, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3Q5JSP0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FGD3Q5JSP0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FGD3Q5JSP0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 TPRG1LP1-201ENST00000598702 760 ntBASIC18.83■□□□□ 0.6
FGD3Q5JSP0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.83■□□□□ 0.6
FGD3Q5JSP0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 AC079140.4-201ENST00000507448 529 ntBASIC18.82■□□□□ 0.6
FGD3Q5JSP0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 AL354811.1-201ENST00000610286 706 ntBASIC18.82■□□□□ 0.6
FGD3Q5JSP0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD3Q5JSP0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 AC245052.3-201ENST00000450182 901 ntBASIC18.81■□□□□ 0.6
FGD3Q5JSP0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 AC110285.6-201ENST00000617652 491 ntBASIC18.81■□□□□ 0.6
FGD3Q5JSP0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 KRT87P-202ENST00000534226 1464 ntBASIC18.81■□□□□ 0.6
FGD3Q5JSP0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FGD3Q5JSP0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FGD3Q5JSP0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 AL136967.2-201ENST00000623968 743 ntBASIC18.79■□□□□ 0.6
FGD3Q5JSP0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FGD3Q5JSP0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms