Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
USH1GQ495M9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
USH1GQ495M9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
USH1GQ495M9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.13■■□□□ 1.29
USH1GQ495M9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
USH1GQ495M9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
USH1GQ495M9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
USH1GQ495M9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.13■■□□□ 1.29
USH1GQ495M9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
USH1GQ495M9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.13■■□□□ 1.29
USH1GQ495M9 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.13■■□□□ 1.29
USH1GQ495M9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.13■■□□□ 1.29
USH1GQ495M9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
USH1GQ495M9 MTDHP1-201ENST00000605323 784 ntBASIC23.13■■□□□ 1.29
USH1GQ495M9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
USH1GQ495M9 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.13■■□□□ 1.29
USH1GQ495M9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
USH1GQ495M9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
USH1GQ495M9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.13■■□□□ 1.29
USH1GQ495M9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
USH1GQ495M9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.12■■□□□ 1.29
USH1GQ495M9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
USH1GQ495M9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.12■■□□□ 1.29
USH1GQ495M9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
USH1GQ495M9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
USH1GQ495M9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.12■■□□□ 1.29
USH1GQ495M9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.12■■□□□ 1.29
USH1GQ495M9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.12■■□□□ 1.29
USH1GQ495M9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.12■■□□□ 1.29
USH1GQ495M9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.12■■□□□ 1.29
USH1GQ495M9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.12■■□□□ 1.29
USH1GQ495M9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.12■■□□□ 1.29
USH1GQ495M9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.12■■□□□ 1.29
USH1GQ495M9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.12■■□□□ 1.29
USH1GQ495M9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USH1GQ495M9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.11■■□□□ 1.29
USH1GQ495M9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.11■■□□□ 1.29
USH1GQ495M9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.11■■□□□ 1.29
USH1GQ495M9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 UBE2SP1-201ENST00000450587 669 ntBASIC23.11■■□□□ 1.29
USH1GQ495M9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.11■■□□□ 1.29
USH1GQ495M9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.11■■□□□ 1.29
USH1GQ495M9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.11■■□□□ 1.29
USH1GQ495M9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.11■■□□□ 1.29
USH1GQ495M9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 DPP3P2-201ENST00000416030 1696 ntBASIC23.11■■□□□ 1.29
USH1GQ495M9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.11■■□□□ 1.29
USH1GQ495M9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
USH1GQ495M9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.1■■□□□ 1.29
USH1GQ495M9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
USH1GQ495M9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
USH1GQ495M9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.1■■□□□ 1.29
USH1GQ495M9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.1■■□□□ 1.29
USH1GQ495M9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
USH1GQ495M9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
USH1GQ495M9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.1■■□□□ 1.29
USH1GQ495M9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms