Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SKOR1P84550 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SKOR1P84550 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.06■□□□□ 0.96
SKOR1P84550 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.06■□□□□ 0.96
SKOR1P84550 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SKOR1P84550 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SKOR1P84550 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SKOR1P84550 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SKOR1P84550 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.05■□□□□ 0.96
SKOR1P84550 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.05■□□□□ 0.96
SKOR1P84550 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.05■□□□□ 0.96
SKOR1P84550 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.05■□□□□ 0.96
SKOR1P84550 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.05■□□□□ 0.96
SKOR1P84550 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.05■□□□□ 0.96
SKOR1P84550 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 AC004408.2-201ENST00000623613 2777 ntBASIC21.05■□□□□ 0.96
SKOR1P84550 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.05■□□□□ 0.96
SKOR1P84550 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SKOR1P84550 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SKOR1P84550 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.04■□□□□ 0.96
SKOR1P84550 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 AC245052.3-201ENST00000450182 901 ntBASIC21.04■□□□□ 0.96
SKOR1P84550 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SKOR1P84550 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.04■□□□□ 0.96
SKOR1P84550 AC073111.5-205ENST00000641717 521 ntBASIC21.04■□□□□ 0.96
SKOR1P84550 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SKOR1P84550 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SKOR1P84550 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.04■□□□□ 0.96
SKOR1P84550 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SKOR1P84550 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SKOR1P84550 TCF3P1-201ENST00000423021 1937 ntBASIC21.04■□□□□ 0.96
SKOR1P84550 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.04■□□□□ 0.96
SKOR1P84550 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.04■□□□□ 0.96
SKOR1P84550 RBM17P2-201ENST00000616397 1405 ntBASIC21.04■□□□□ 0.96
SKOR1P84550 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SKOR1P84550 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SKOR1P84550 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SKOR1P84550 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.03■□□□□ 0.96
SKOR1P84550 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SKOR1P84550 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SKOR1P84550 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SKOR1P84550 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SKOR1P84550 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SKOR1P84550 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SKOR1P84550 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.03■□□□□ 0.96
SKOR1P84550 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SKOR1P84550 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SKOR1P84550 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SKOR1P84550 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.02■□□□□ 0.96
SKOR1P84550 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SKOR1P84550 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.02■□□□□ 0.96
SKOR1P84550 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.02■□□□□ 0.96
SKOR1P84550 AC016769.1-201ENST00000409132 1010 ntBASIC21.02■□□□□ 0.96
SKOR1P84550 KRT18P11-201ENST00000435214 1283 ntBASIC21.02■□□□□ 0.96
SKOR1P84550 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.02■□□□□ 0.96
SKOR1P84550 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SKOR1P84550 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.02■□□□□ 0.96
SKOR1P84550 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.02■□□□□ 0.96
SKOR1P84550 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.02■□□□□ 0.95
SKOR1P84550 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SKOR1P84550 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.01■□□□□ 0.95
SKOR1P84550 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.01■□□□□ 0.95
SKOR1P84550 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.01■□□□□ 0.95
SKOR1P84550 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SKOR1P84550 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SKOR1P84550 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SKOR1P84550 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SKOR1P84550 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SKOR1P84550 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SKOR1P84550 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.01■□□□□ 0.95
SKOR1P84550 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.01■□□□□ 0.95
SKOR1P84550 AC243732.1-201ENST00000612648 864 ntBASIC21.01■□□□□ 0.95
SKOR1P84550 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.01■□□□□ 0.95
SKOR1P84550 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.01■□□□□ 0.95
SKOR1P84550 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SKOR1P84550 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms