Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.62■□□□□ 0.89
ITGA8P53708 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ITGA8P53708 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ITGA8P53708 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.61■□□□□ 0.89
ITGA8P53708 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.61■□□□□ 0.89
ITGA8P53708 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.61■□□□□ 0.89
ITGA8P53708 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.61■□□□□ 0.89
ITGA8P53708 SLC7A5P1-201ENST00000568957 537 ntBASIC20.61■□□□□ 0.89
ITGA8P53708 TERF1P2-201ENST00000583350 1212 ntBASIC20.61■□□□□ 0.89
ITGA8P53708 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ITGA8P53708 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ITGA8P53708 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ITGA8P53708 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ITGA8P53708 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ITGA8P53708 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA8P53708 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
ITGA8P53708 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ITGA8P53708 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.61■□□□□ 0.89
ITGA8P53708 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.6■□□□□ 0.89
ITGA8P53708 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ITGA8P53708 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.6■□□□□ 0.89
ITGA8P53708 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.6■□□□□ 0.89
ITGA8P53708 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
ITGA8P53708 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ITGA8P53708 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.6■□□□□ 0.89
ITGA8P53708 AC123595.1-201ENST00000440769 1046 ntBASIC20.6■□□□□ 0.89
ITGA8P53708 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ITGA8P53708 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.6■□□□□ 0.89
ITGA8P53708 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ITGA8P53708 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.6■□□□□ 0.89
ITGA8P53708 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ITGA8P53708 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.6■□□□□ 0.89
ITGA8P53708 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.6■□□□□ 0.89
ITGA8P53708 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.6■□□□□ 0.89
ITGA8P53708 AC004854.2-201ENST00000608450 1441 ntBASIC20.6■□□□□ 0.89
ITGA8P53708 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ITGA8P53708 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ITGA8P53708 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITGA8P53708 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA8P53708 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 TREX1-205ENST00000625293 1783 ntBASIC20.59■□□□□ 0.89
ITGA8P53708 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA8P53708 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA8P53708 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ITGA8P53708 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.59■□□□□ 0.89
ITGA8P53708 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.59■□□□□ 0.89
ITGA8P53708 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.59■□□□□ 0.89
ITGA8P53708 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA8P53708 AC005332.7-201ENST00000614046 2005 ntBASIC20.59■□□□□ 0.89
ITGA8P53708 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA8P53708 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA8P53708 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
ITGA8P53708 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA8P53708 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.58■□□□□ 0.89
ITGA8P53708 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.58■□□□□ 0.89
ITGA8P53708 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
ITGA8P53708 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.58■□□□□ 0.89
ITGA8P53708 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.58■□□□□ 0.89
ITGA8P53708 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA8P53708 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.58■□□□□ 0.89
ITGA8P53708 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA8P53708 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.58■□□□□ 0.88
ITGA8P53708 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
ITGA8P53708 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGA8P53708 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.58■□□□□ 0.88
ITGA8P53708 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.58■□□□□ 0.88
ITGA8P53708 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ITGA8P53708 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.58■□□□□ 0.88
ITGA8P53708 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms