Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
GTF2A1P52655 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF2A1P52655 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF2A1P52655 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF2A1P52655 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GTF2A1P52655 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF2A1P52655 AC129492.7-201ENST00000622992 756 ntBASIC19.71■□□□□ 0.75
GTF2A1P52655 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF2A1P52655 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
GTF2A1P52655 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF2A1P52655 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF2A1P52655 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GTF2A1P52655 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
GTF2A1P52655 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2A1P52655 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GTF2A1P52655 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.7■□□□□ 0.74
GTF2A1P52655 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
GTF2A1P52655 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GTF2A1P52655 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2A1P52655 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GTF2A1P52655 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2A1P52655 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.7■□□□□ 0.74
GTF2A1P52655 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF2A1P52655 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
GTF2A1P52655 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GTF2A1P52655 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.69■□□□□ 0.74
GTF2A1P52655 U85056.1-201ENST00000616429 682 ntBASIC19.69■□□□□ 0.74
GTF2A1P52655 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.69■□□□□ 0.74
GTF2A1P52655 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF2A1P52655 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.69■□□□□ 0.74
GTF2A1P52655 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GTF2A1P52655 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
GTF2A1P52655 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.68■□□□□ 0.74
GTF2A1P52655 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
GTF2A1P52655 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
GTF2A1P52655 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
GTF2A1P52655 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GTF2A1P52655 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GTF2A1P52655 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms