Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCNKAP51800 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLCNKAP51800 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLCNKAP51800 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCNKAP51800 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCNKAP51800 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCNKAP51800 AC008687.6-201ENST00000596318 630 ntBASIC19.74■□□□□ 0.75
CLCNKAP51800 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCNKAP51800 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCNKAP51800 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCNKAP51800 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCNKAP51800 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCNKAP51800 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCNKAP51800 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CLCNKAP51800 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLCNKAP51800 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.73■□□□□ 0.75
CLCNKAP51800 KRT17P3-201ENST00000420566 1262 ntBASIC19.73■□□□□ 0.75
CLCNKAP51800 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CLCNKAP51800 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCNKAP51800 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCNKAP51800 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLCNKAP51800 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.73■□□□□ 0.75
CLCNKAP51800 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.73■□□□□ 0.75
CLCNKAP51800 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCNKAP51800 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCNKAP51800 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCNKAP51800 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLCNKAP51800 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCNKAP51800 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 POM121L13P-201ENST00000422362 380 ntBASIC19.72■□□□□ 0.75
CLCNKAP51800 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.72■□□□□ 0.75
CLCNKAP51800 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCNKAP51800 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCNKAP51800 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCNKAP51800 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCNKAP51800 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCNKAP51800 AC073648.6-201ENST00000641589 218 ntBASIC19.72■□□□□ 0.75
CLCNKAP51800 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCNKAP51800 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLCNKAP51800 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCNKAP51800 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCNKAP51800 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCNKAP51800 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCNKAP51800 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCNKAP51800 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.71■□□□□ 0.75
CLCNKAP51800 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCNKAP51800 AC120498.8-201ENST00000614275 531 ntBASIC19.71■□□□□ 0.75
CLCNKAP51800 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCNKAP51800 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCNKAP51800 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCNKAP51800 AC092720.2-201ENST00000602388 1665 ntBASIC19.71■□□□□ 0.75
CLCNKAP51800 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCNKAP51800 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCNKAP51800 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CLCNKAP51800 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCNKAP51800 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLCNKAP51800 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLCNKAP51800 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCNKAP51800 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCNKAP51800 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLCNKAP51800 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCNKAP51800 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCNKAP51800 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCNKAP51800 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCNKAP51800 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms