Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT20P35900 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KRT20P35900 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.06■□□□□ 0.64
KRT20P35900 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT20P35900 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT20P35900 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRT20P35900 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT20P35900 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT20P35900 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT20P35900 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRT20P35900 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KRT20P35900 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT20P35900 AC008694.1-202ENST00000636953 945 ntBASIC19.05■□□□□ 0.64
KRT20P35900 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT20P35900 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT20P35900 AC011484.1-201ENST00000377652 1995 ntBASIC19.04■□□□□ 0.64
KRT20P35900 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT20P35900 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT20P35900 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT20P35900 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT20P35900 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT20P35900 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
KRT20P35900 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT20P35900 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT20P35900 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT20P35900 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT20P35900 AC020907.5-201ENST00000624372 1936 ntBASIC19.04■□□□□ 0.64
KRT20P35900 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT20P35900 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT20P35900 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT20P35900 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 AC112907.3-201ENST00000577781 2400 ntBASIC19.03■□□□□ 0.64
KRT20P35900 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT20P35900 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 AC087289.5-201ENST00000586076 3175 ntBASIC19.03■□□□□ 0.64
KRT20P35900 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT20P35900 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT20P35900 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.03■□□□□ 0.64
KRT20P35900 AL162412.1-201ENST00000567129 965 ntBASIC19.03■□□□□ 0.64
KRT20P35900 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT20P35900 AC069236.1-201ENST00000604339 616 ntBASIC19.03■□□□□ 0.64
KRT20P35900 AC073111.5-205ENST00000641717 521 ntBASIC19.03■□□□□ 0.64
KRT20P35900 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT20P35900 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT20P35900 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms