Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX6P35712 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX6P35712 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.02■□□□□ 0.48
SOX6P35712 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SOX6P35712 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SOX6P35712 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX6P35712 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.02■□□□□ 0.48
SOX6P35712 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.02■□□□□ 0.48
SOX6P35712 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.02■□□□□ 0.48
SOX6P35712 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SOX6P35712 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SOX6P35712 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.02■□□□□ 0.47
SOX6P35712 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SOX6P35712 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SOX6P35712 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SOX6P35712 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 AL356740.2-201ENST00000601559 647 ntBASIC18.01■□□□□ 0.47
SOX6P35712 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.01■□□□□ 0.47
SOX6P35712 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX6P35712 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
SOX6P35712 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
SOX6P35712 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SOX6P35712 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18■□□□□ 0.47
SOX6P35712 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18■□□□□ 0.47
SOX6P35712 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18■□□□□ 0.47
SOX6P35712 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SOX6P35712 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18■□□□□ 0.47
SOX6P35712 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18■□□□□ 0.47
SOX6P35712 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18■□□□□ 0.47
SOX6P35712 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX6P35712 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SOX6P35712 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SOX6P35712 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX6P35712 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.99■□□□□ 0.47
SOX6P35712 TMEM179-206ENST00000616017 1645 ntBASIC17.99■□□□□ 0.47
SOX6P35712 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.99■□□□□ 0.47
SOX6P35712 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 pRNA.6-201ENST00000610482 90 ntBASIC17.99■□□□□ 0.47
SOX6P35712 pRNA.5-201ENST00000612139 90 ntBASIC17.99■□□□□ 0.47
SOX6P35712 pRNA.11-201ENST00000618423 90 ntBASIC17.99■□□□□ 0.47
SOX6P35712 pRNA.13-201ENST00000619112 90 ntBASIC17.99■□□□□ 0.47
SOX6P35712 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX6P35712 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX6P35712 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX6P35712 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX6P35712 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SOX6P35712 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
SOX6P35712 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.99■□□□□ 0.47
SOX6P35712 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX6P35712 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms