Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
CCND1P24385 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCND1P24385 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCND1P24385 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCND1P24385 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
CCND1P24385 KRT18P11-201ENST00000435214 1283 ntBASIC20.18■□□□□ 0.82
CCND1P24385 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.18■□□□□ 0.82
CCND1P24385 AC245052.3-201ENST00000450182 901 ntBASIC20.18■□□□□ 0.82
CCND1P24385 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.18■□□□□ 0.82
CCND1P24385 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.18■□□□□ 0.82
CCND1P24385 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCND1P24385 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.17■□□□□ 0.82
CCND1P24385 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCND1P24385 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.17■□□□□ 0.82
CCND1P24385 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCND1P24385 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.17■□□□□ 0.82
CCND1P24385 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.17■□□□□ 0.82
CCND1P24385 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCND1P24385 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.17■□□□□ 0.82
CCND1P24385 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.17■□□□□ 0.82
CCND1P24385 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.17■□□□□ 0.82
CCND1P24385 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.17■□□□□ 0.82
CCND1P24385 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCND1P24385 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCND1P24385 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCND1P24385 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCND1P24385 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCND1P24385 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 PLK5-205ENST00000642079 1969 ntBASIC20.16■□□□□ 0.82
CCND1P24385 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 MIR935-201ENST00000401179 91 ntBASIC20.16■□□□□ 0.82
CCND1P24385 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 SLC7A5P2-201ENST00000553010 536 ntBASIC20.16■□□□□ 0.82
CCND1P24385 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.16■□□□□ 0.82
CCND1P24385 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.16■□□□□ 0.82
CCND1P24385 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCND1P24385 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCND1P24385 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCND1P24385 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCND1P24385 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
CCND1P24385 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.15■□□□□ 0.82
CCND1P24385 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.15■□□□□ 0.82
CCND1P24385 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.15■□□□□ 0.82
CCND1P24385 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCND1P24385 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 AL162430.1-201ENST00000480705 870 ntBASIC20.15■□□□□ 0.82
CCND1P24385 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.15■□□□□ 0.82
CCND1P24385 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CCND1P24385 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.15■□□□□ 0.82
CCND1P24385 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCND1P24385 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCND1P24385 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.14■□□□□ 0.81
CCND1P24385 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.14■□□□□ 0.81
CCND1P24385 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCND1P24385 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCND1P24385 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCND1P24385 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCND1P24385 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCND1P24385 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.14■□□□□ 0.81
CCND1P24385 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms