Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.63■□□□□ 0.41
ATF1P18846 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATF1P18846 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.63■□□□□ 0.41
ATF1P18846 SLC7A5P2-201ENST00000553010 536 ntBASIC17.63■□□□□ 0.41
ATF1P18846 AP001160.3-201ENST00000601484 763 ntBASIC17.63■□□□□ 0.41
ATF1P18846 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.63■□□□□ 0.41
ATF1P18846 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.63■□□□□ 0.41
ATF1P18846 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.63■□□□□ 0.41
ATF1P18846 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
ATF1P18846 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATF1P18846 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
ATF1P18846 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF1P18846 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF1P18846 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF1P18846 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 AC123595.1-201ENST00000440769 1046 ntBASIC17.62■□□□□ 0.41
ATF1P18846 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF1P18846 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATF1P18846 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF1P18846 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF1P18846 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF1P18846 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATF1P18846 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
ATF1P18846 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 AC116050.2-201ENST00000612102 1779 ntBASIC17.61■□□□□ 0.41
ATF1P18846 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF1P18846 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF1P18846 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF1P18846 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.61■□□□□ 0.41
ATF1P18846 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF1P18846 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF1P18846 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ATF1P18846 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATF1P18846 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF1P18846 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF1P18846 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.61■□□□□ 0.41
ATF1P18846 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF1P18846 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ATF1P18846 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATF1P18846 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATF1P18846 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 MIR638-201ENST00000385237 100 ntBASIC17.6■□□□□ 0.41
ATF1P18846 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF1P18846 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.6■□□□□ 0.41
ATF1P18846 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.6■□□□□ 0.41
ATF1P18846 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATF1P18846 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.6■□□□□ 0.41
ATF1P18846 MIR2861-201ENST00000636310 90 ntBASIC17.6■□□□□ 0.41
ATF1P18846 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF1P18846 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.6■□□□□ 0.41
ATF1P18846 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.6■□□□□ 0.41
ATF1P18846 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 AL691432.2-201ENST00000607222 2038 ntBASIC17.6■□□□□ 0.41
ATF1P18846 AC093484.2-201ENST00000580996 2166 ntBASIC17.6■□□□□ 0.41
ATF1P18846 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF1P18846 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms