Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.21■□□□□ 0.83
VAPBO95292 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 CYP2T1P-201ENST00000432607 1285 ntBASIC20.21■□□□□ 0.83
VAPBO95292 AC100791.3-201ENST00000617619 330 ntBASIC20.21■□□□□ 0.83
VAPBO95292 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VAPBO95292 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.21■□□□□ 0.83
VAPBO95292 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAPBO95292 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.2■□□□□ 0.83
VAPBO95292 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.2■□□□□ 0.82
VAPBO95292 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.2■□□□□ 0.82
VAPBO95292 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
VAPBO95292 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.2■□□□□ 0.82
VAPBO95292 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.2■□□□□ 0.82
VAPBO95292 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.2■□□□□ 0.82
VAPBO95292 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.2■□□□□ 0.82
VAPBO95292 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.2■□□□□ 0.82
VAPBO95292 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VAPBO95292 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAPBO95292 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.2■□□□□ 0.82
VAPBO95292 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.2■□□□□ 0.82
VAPBO95292 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VAPBO95292 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 MIR935-201ENST00000401179 91 ntBASIC20.19■□□□□ 0.82
VAPBO95292 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 AC069236.1-201ENST00000604339 616 ntBASIC20.19■□□□□ 0.82
VAPBO95292 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.19■□□□□ 0.82
VAPBO95292 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.19■□□□□ 0.82
VAPBO95292 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAPBO95292 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.19■□□□□ 0.82
VAPBO95292 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
VAPBO95292 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAPBO95292 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.18■□□□□ 0.82
VAPBO95292 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VAPBO95292 AC004911.1-201ENST00000416316 871 ntBASIC20.18■□□□□ 0.82
VAPBO95292 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.18■□□□□ 0.82
VAPBO95292 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.18■□□□□ 0.82
VAPBO95292 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.18■□□□□ 0.82
VAPBO95292 AC092437.1-201ENST00000624794 1048 ntBASIC20.18■□□□□ 0.82
VAPBO95292 AC008694.1-202ENST00000636953 945 ntBASIC20.18■□□□□ 0.82
VAPBO95292 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VAPBO95292 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.18■□□□□ 0.82
VAPBO95292 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAPBO95292 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAPBO95292 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
VAPBO95292 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
VAPBO95292 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
VAPBO95292 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.17■□□□□ 0.82
VAPBO95292 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.17■□□□□ 0.82
VAPBO95292 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.17■□□□□ 0.82
VAPBO95292 IKBKGP1-201ENST00000612193 1073 ntBASIC20.17■□□□□ 0.82
VAPBO95292 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.17■□□□□ 0.82
VAPBO95292 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.17■□□□□ 0.82
VAPBO95292 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.17■□□□□ 0.82
VAPBO95292 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.17■□□□□ 0.82
VAPBO95292 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VAPBO95292 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
VAPBO95292 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAPBO95292 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
VAPBO95292 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms