Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.12■■□□□ 1.29
ATP2A1O14983 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP2A1O14983 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP2A1O14983 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP2A1O14983 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
ATP2A1O14983 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.12■■□□□ 1.29
ATP2A1O14983 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP2A1O14983 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP2A1O14983 KRT17P2-201ENST00000300992 1314 ntBASIC23.11■■□□□ 1.29
ATP2A1O14983 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP2A1O14983 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP2A1O14983 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP2A1O14983 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP2A1O14983 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP2A1O14983 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
ATP2A1O14983 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
ATP2A1O14983 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP2A1O14983 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.11■■□□□ 1.29
ATP2A1O14983 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP2A1O14983 AC113410.3-201ENST00000623366 203 ntBASIC23.11■■□□□ 1.29
ATP2A1O14983 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP2A1O14983 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ATP2A1O14983 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.1■■□□□ 1.29
ATP2A1O14983 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
ATP2A1O14983 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.1■■□□□ 1.29
ATP2A1O14983 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
ATP2A1O14983 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ATP2A1O14983 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ATP2A1O14983 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.1■■□□□ 1.29
ATP2A1O14983 TSPY7P-201ENST00000431358 1114 ntBASIC23.1■■□□□ 1.29
ATP2A1O14983 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.1■■□□□ 1.29
ATP2A1O14983 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.1■■□□□ 1.29
ATP2A1O14983 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP2A1O14983 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP2A1O14983 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP2A1O14983 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP2A1O14983 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.09■■□□□ 1.29
ATP2A1O14983 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.09■■□□□ 1.29
ATP2A1O14983 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP2A1O14983 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP2A1O14983 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP2A1O14983 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP2A1O14983 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
ATP2A1O14983 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.09■■□□□ 1.29
ATP2A1O14983 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ATP2A1O14983 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP2A1O14983 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 AC124283.5-201ENST00000624661 1809 ntBASIC23.08■■□□□ 1.29
ATP2A1O14983 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.08■■□□□ 1.29
ATP2A1O14983 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.08■■□□□ 1.29
ATP2A1O14983 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
ATP2A1O14983 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
ATP2A1O14983 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.08■■□□□ 1.29
ATP2A1O14983 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.08■■□□□ 1.29
ATP2A1O14983 AL121906.2-201ENST00000621597 723 ntBASIC23.08■■□□□ 1.29
ATP2A1O14983 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
ATP2A1O14983 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP2A1O14983 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATP2A1O14983 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATP2A1O14983 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
ATP2A1O14983 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATP2A1O14983 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ATP2A1O14983 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
ATP2A1O14983 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP2A1O14983 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
ATP2A1O14983 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 KRT16P5-201ENST00000455284 522 ntBASIC23.07■■□□□ 1.28
ATP2A1O14983 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.07■■□□□ 1.28
ATP2A1O14983 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2A1O14983 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP2A1O14983 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2A1O14983 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 MIR4785-201ENST00000585005 73 ntBASIC23.07■■□□□ 1.28
ATP2A1O14983 REXO1L12P-201ENST00000622156 912 ntBASIC23.07■■□□□ 1.28
ATP2A1O14983 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms