Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.72■□□□□ 0.75
VGLL3A8MV65 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.72■□□□□ 0.75
VGLL3A8MV65 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VGLL3A8MV65 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.72■□□□□ 0.75
VGLL3A8MV65 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VGLL3A8MV65 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VGLL3A8MV65 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
VGLL3A8MV65 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VGLL3A8MV65 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VGLL3A8MV65 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.72■□□□□ 0.75
VGLL3A8MV65 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VGLL3A8MV65 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
VGLL3A8MV65 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.71■□□□□ 0.75
VGLL3A8MV65 RAP2CP1-202ENST00000605179 643 ntBASIC19.71■□□□□ 0.75
VGLL3A8MV65 AC133552.2-201ENST00000619106 1032 ntBASIC19.71■□□□□ 0.75
VGLL3A8MV65 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.71■□□□□ 0.75
VGLL3A8MV65 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VGLL3A8MV65 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VGLL3A8MV65 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 KRT18P60-201ENST00000312876 1297 ntBASIC19.7■□□□□ 0.74
VGLL3A8MV65 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VGLL3A8MV65 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VGLL3A8MV65 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 AC012354.3-201ENST00000623734 483 ntBASIC19.69■□□□□ 0.74
VGLL3A8MV65 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 AL512408.1-201ENST00000569378 2000 ntBASIC19.69■□□□□ 0.74
VGLL3A8MV65 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
VGLL3A8MV65 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VGLL3A8MV65 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms