Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 KRT18P14-201ENST00000534205 1250 ntBASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 ZNRF2P3-201ENST00000424200 374 ntBASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF103-CHMP3A0A140T963 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC004854.2-201ENST00000608450 1441 ntBASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 BX323043.1-201ENST00000641006 1765 ntBASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF103-CHMP3A0A140T963 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC116562.4-201ENST00000641316 2276 ntBASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF103-CHMP3A0A140T963 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC098818.2-201ENST00000564925 2320 ntBASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF103-CHMP3A0A140T963 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms