Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 AC009237.3-201ENST00000393279 1427 ntBASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV34A0A0B4J273 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV34A0A0B4J273 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 AC004408.2-201ENST00000623613 2777 ntBASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 DUX4L19-201ENST00000557448 1267 ntBASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 AC011298.3-201ENST00000615796 283 ntBASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV34A0A0B4J273 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV34A0A0B4J273 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV34A0A0B4J273 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV34A0A0B4J273 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV34A0A0B4J273 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV34A0A0B4J273 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV34A0A0B4J273 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV34A0A0B4J273 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms