Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 SMUG1P1-201ENST00000590640 811 ntBASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 AC009237.3-201ENST00000393279 1427 ntBASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV1-1A0A0B4J248 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 TSPY13P-201ENST00000338964 914 ntBASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV1-1A0A0B4J248 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV1-1A0A0B4J248 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV1-1A0A0B4J248 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV1-1A0A0B4J248 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV1-1A0A0B4J248 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TRAV1-1A0A0B4J248 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV1-1A0A0B4J248 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 DPP3P2-201ENST00000416030 1696 ntBASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms