Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC116050.2-201ENST00000612102 1779 ntBASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TPRG1LP1-201ENST00000598702 760 ntBASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DPP3P2-201ENST00000416030 1696 ntBASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PBX2P1-201ENST00000493219 1291 ntBASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC012414.1-201ENST00000556676 535 ntBASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KRT16P2-201ENST00000414673 1423 ntBASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KRT87P-202ENST00000534226 1464 ntBASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC005332.7-201ENST00000614046 2005 ntBASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC096631.2-201ENST00000436136 790 ntBASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC079140.4-201ENST00000507448 529 ntBASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TNXA-203ENST00000507684 2038 ntBASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms