Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AL451054.1-201ENST00000621770 772 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 MFSD8-234ENST00000641503 1082 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AL590004.4-201ENST00000566733 7060 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 RPL12P38-202ENST00000588627 2319 ntBASIC8.26□□□□□ -1.09
LMO3Q8TAP4 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
LMO3Q8TAP4 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 MAPK10-377ENST00000642006 2752 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AL390039.1-201ENST00000399148 611 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RPSAP42-201ENST00000403415 878 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC099344.1-201ENST00000433548 492 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 DNAJA1P6-201ENST00000437347 354 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC231532.1-201ENST00000438584 312 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AP006193.1-201ENST00000440724 485 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 OR7E102P-201ENST00000448855 1015 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RN7SL19P-201ENST00000462522 306 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RN7SL223P-201ENST00000470401 294 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RN7SL241P-201ENST00000482973 236 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC108120.1-201ENST00000506543 991 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 GAPDHP61-201ENST00000507324 1005 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RN7SKP105-201ENST00000517192 314 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC244090.2-201ENST00000567614 792 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RN7SL237P-201ENST00000580912 287 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 MIR4437-201ENST00000581331 60 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC018737.1-201ENST00000603900 204 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AL096855.2-201ENST00000605785 369 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 PFN1P2-202ENST00000621347 397 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 CREM-218ENST00000460270 1416 ntTSL 2 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 AL353795.1-201ENST00000439134 1775 ntBASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LMO3Q8TAP4 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 CTH-203ENST00000411986 2044 ntTSL 2 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 CPEB1-AS1-202ENST00000618020 2994 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 EEF1A1P15-201ENST00000395772 1408 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 OR7E122P-202ENST00000641144 6171 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 MIR555-201ENST00000384987 96 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 CES5AP1-201ENST00000400418 859 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 BCRP8-201ENST00000412037 255 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.24□□□□□ -1.09
LMO3Q8TAP4 AL606752.1-201ENST00000435442 666 ntBASIC8.24□□□□□ -1.09
LMO3Q8TAP4 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms