RNA–Protein interactions for RNA: ENST00000399148.3

AL390039.1-201, humanhuman

BASIC

Gene AL390039.1, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390039.1-201ENST00000399148 AEBP2Q6ZN18 517 aaPredicted RBP35.8■■■■□ 3.32
AL390039.1-201ENST00000399148 CHIC1Q5VXU3 224 aa34.7■■■■□ 3.15
AL390039.1-201ENST00000399148 PHF23Q9BUL5 403 aaPredicted RBP30.48■■■□□ 2.47
AL390039.1-201ENST00000399148 SENP3Q9H4L4 574 aaPredicted RBP30.43■■■□□ 2.46
AL390039.1-201ENST00000399148 FOXD1Q16676 465 aa28.26■■■□□ 2.11
AL390039.1-201ENST00000399148 PLPPR3Q6T4P5 718 aa28.06■■■□□ 2.08
AL390039.1-201ENST00000399148 PPP6R1Q9UPN7 881 aa26.98■■□□□ 1.91
AL390039.1-201ENST00000399148 ADRA2BP18089 450 aa26.95■■□□□ 1.9
AL390039.1-201ENST00000399148 PIAS4Q8N2W9 510 aaPredicted RBP26.6■■□□□ 1.85
AL390039.1-201ENST00000399148 MSH5O43196 834 aa26.18■■□□□ 1.78
AL390039.1-201ENST00000399148 PPP4R3CPQ6ZMV5 832 aa24.69■■□□□ 1.54
AL390039.1-201ENST00000399148 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
AL390039.1-201ENST00000399148 MAPK8IP2Q13387 824 aaPredicted RBP24.53■■□□□ 1.52
AL390039.1-201ENST00000399148 POTEDQ86YR6 584 aa24.3■■□□□ 1.48
AL390039.1-201ENST00000399148 DMRT2Q9Y5R5 561 aa24.24■■□□□ 1.47
AL390039.1-201ENST00000399148 CNKSR2Q8WXI2 1034 aa24.06■■□□□ 1.44
AL390039.1-201ENST00000399148 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
AL390039.1-201ENST00000399148 KCNA4P22459 653 aa23.81■■□□□ 1.4
AL390039.1-201ENST00000399148 RNF216Q9NWF9 866 aaPredicted RBP23.66■■□□□ 1.38
AL390039.1-201ENST00000399148 HOXD11P31277 338 aaPredicted RBP23.63■■□□□ 1.37
AL390039.1-201ENST00000399148 NPM3O75607 178 aaKnown RBP23.61■■□□□ 1.37
AL390039.1-201ENST00000399148 DCAF8L1A6NGE4 600 aa23.21■■□□□ 1.31
AL390039.1-201ENST00000399148 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
AL390039.1-201ENST00000399148 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
AL390039.1-201ENST00000399148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.2
AL390039.1-201ENST00000399148 RNF39Q9H2S5 420 aa22.41■■□□□ 1.18
AL390039.1-201ENST00000399148 SLC4A2P04920 1241 aa22.37■■□□□ 1.17
AL390039.1-201ENST00000399148 U3KPZ7 1027 aaPredicted RBP22.14■■□□□ 1.13
AL390039.1-201ENST00000399148 C1QBPQ07021 282 aaKnown RBP22.12■■□□□ 1.13
AL390039.1-201ENST00000399148 CACNB1Q02641 598 aaPredicted RBP22.01■■□□□ 1.11
AL390039.1-201ENST00000399148 FOXD4L1Q9NU39 408 aa22■■□□□ 1.11
AL390039.1-201ENST00000399148 ZBTB22O15209 634 aa21.91■■□□□ 1.1
AL390039.1-201ENST00000399148 MYCNP04198 464 aaPredicted RBP21.83■■□□□ 1.09
AL390039.1-201ENST00000399148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.76■■□□□ 1.07
AL390039.1-201ENST00000399148 HNRNPUL2Q1KMD3 747 aaKnown RBP21.76■■□□□ 1.07
AL390039.1-201ENST00000399148 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
AL390039.1-201ENST00000399148 SAMD1Q6SPF0 538 aaPredicted RBP21.68■■□□□ 1.06
AL390039.1-201ENST00000399148 APLP2Q06481 763 aa21.6■■□□□ 1.05
AL390039.1-201ENST00000399148 SPINK5Q9NQ38 1064 aaPredicted RBP21.6■■□□□ 1.05
AL390039.1-201ENST00000399148 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
AL390039.1-201ENST00000399148 CAPN15O75808 1086 aa21.52■■□□□ 1.04
AL390039.1-201ENST00000399148 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
AL390039.1-201ENST00000399148 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
AL390039.1-201ENST00000399148 ATXN8OSP0DMR3 200 aa21.26■□□□□ 0.99
AL390039.1-201ENST00000399148 ATF5Q9Y2D1 282 aaPredicted RBP21.26■□□□□ 0.99
AL390039.1-201ENST00000399148 DSG3P32926 999 aa21.22■□□□□ 0.99
AL390039.1-201ENST00000399148 ABCB7O75027 752 aa21.09■□□□□ 0.97
AL390039.1-201ENST00000399148 POLA2Q14181 598 aa20.94■□□□□ 0.94
AL390039.1-201ENST00000399148 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
AL390039.1-201ENST00000399148 FBLN2P98095 1184 aa20.4■□□□□ 0.86
AL390039.1-201ENST00000399148 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
AL390039.1-201ENST00000399148 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
AL390039.1-201ENST00000399148 RBM42Q9BTD8 480 aaKnown RBP20.24■□□□□ 0.83
AL390039.1-201ENST00000399148 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
AL390039.1-201ENST00000399148 SPDYE2BA6NHP3 402 aa20.02■□□□□ 0.8
AL390039.1-201ENST00000399148 SPDYE6P0CI01 402 aa20.02■□□□□ 0.8
AL390039.1-201ENST00000399148 SPDYE2Q495Y8 402 aa20.02■□□□□ 0.8
AL390039.1-201ENST00000399148 AKT1S1Q96B36 256 aa19.93■□□□□ 0.78
AL390039.1-201ENST00000399148 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
AL390039.1-201ENST00000399148 SSUH2Q9Y2M2 353 aa19.83■□□□□ 0.77
AL390039.1-201ENST00000399148 SPDYE4A6NLX3 237 aa19.75■□□□□ 0.75
AL390039.1-201ENST00000399148 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
AL390039.1-201ENST00000399148 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
AL390039.1-201ENST00000399148 PITPNM1O00562 1244 aa19.52■□□□□ 0.72
AL390039.1-201ENST00000399148 FKBP8Q14318 412 aa19.51■□□□□ 0.71
AL390039.1-201ENST00000399148 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
AL390039.1-201ENST00000399148 SPDYE1Q8NFV5 336 aaPredicted RBP19.48■□□□□ 0.71
AL390039.1-201ENST00000399148 CLEC11AQ9Y240 323 aa19.4■□□□□ 0.7
AL390039.1-201ENST00000399148 PROM2Q8N271 834 aa19.39■□□□□ 0.69
AL390039.1-201ENST00000399148 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
AL390039.1-201ENST00000399148 FXR2P51116 673 aaKnown RBP eCLIP19.2■□□□□ 0.66
AL390039.1-201ENST00000399148 PIP4P2Q8N4L2 257 aa19.2■□□□□ 0.66
AL390039.1-201ENST00000399148 PRR29P0C7W0 189 aa19.19■□□□□ 0.66
AL390039.1-201ENST00000399148 POTEHQ6S545 545 aa19.19■□□□□ 0.66
AL390039.1-201ENST00000399148 PRKAR2AP13861 404 aaKnown RBP19.02■□□□□ 0.64
AL390039.1-201ENST00000399148 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
AL390039.1-201ENST00000399148 CREBZFQ9NS37 354 aa18.89■□□□□ 0.61
AL390039.1-201ENST00000399148 FBXO3Q9UK99 471 aa18.89■□□□□ 0.61
AL390039.1-201ENST00000399148 FARP1Q9Y4F1 1045 aaPredicted RBP18.76■□□□□ 0.59
AL390039.1-201ENST00000399148 MIER1Q8N108 512 aa18.74■□□□□ 0.59
AL390039.1-201ENST00000399148 PLCD3Q8N3E9 789 aa18.7■□□□□ 0.58
AL390039.1-201ENST00000399148 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
AL390039.1-201ENST00000399148 MNX1P50219 401 aaPredicted RBP18.66■□□□□ 0.58
AL390039.1-201ENST00000399148 HAX1O00165 279 aa18.65■□□□□ 0.58
AL390039.1-201ENST00000399148 VASPP50552 380 aaPredicted RBP18.65■□□□□ 0.58
AL390039.1-201ENST00000399148 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
AL390039.1-201ENST00000399148 C19orf67A6NJJ6 358 aa18.56■□□□□ 0.56
AL390039.1-201ENST00000399148 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
AL390039.1-201ENST00000399148 CD44P16070 742 aaKnown RBP18.47■□□□□ 0.55
AL390039.1-201ENST00000399148 EVX2Q03828 476 aa18.46■□□□□ 0.55
AL390039.1-201ENST00000399148 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
AL390039.1-201ENST00000399148 IFNLR1Q8IU57 520 aaPredicted RBP18.36■□□□□ 0.53
AL390039.1-201ENST00000399148 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
AL390039.1-201ENST00000399148 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
AL390039.1-201ENST00000399148 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
AL390039.1-201ENST00000399148 NUBP1P53384 320 aa18.3■□□□□ 0.52
AL390039.1-201ENST00000399148 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
AL390039.1-201ENST00000399148 TSPYL2Q9H2G4 693 aaPredicted RBP18.25■□□□□ 0.51
AL390039.1-201ENST00000399148 ZNF579Q8NAF0 562 aaKnown RBP18.22■□□□□ 0.51
AL390039.1-201ENST00000399148 ABCC9O60706 1549 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms