RNA–Protein interactions for RNA: ENST00000466734.5

DUBR-202, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 2,737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-202ENST00000466734 NISCHQ9Y2I1 1504 aa15.7■□□□□ 0.1
DUBR-202ENST00000466734 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
DUBR-202ENST00000466734 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
DUBR-202ENST00000466734 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
DUBR-202ENST00000466734 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
DUBR-202ENST00000466734 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
DUBR-202ENST00000466734 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
DUBR-202ENST00000466734 CHIC1Q5VXU3 224 aa12.92□□□□□ -0.34
DUBR-202ENST00000466734 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
DUBR-202ENST00000466734 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
DUBR-202ENST00000466734 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
DUBR-202ENST00000466734 ABCC9O60706 1549 aa12.63□□□□□ -0.39
DUBR-202ENST00000466734 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
DUBR-202ENST00000466734 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
DUBR-202ENST00000466734 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
DUBR-202ENST00000466734 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
DUBR-202ENST00000466734 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
DUBR-202ENST00000466734 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
DUBR-202ENST00000466734 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
DUBR-202ENST00000466734 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
DUBR-202ENST00000466734 HRCP23327 699 aa12.4□□□□□ -0.42
DUBR-202ENST00000466734 PPARGC1BQ86YN6 1023 aaKnown RBP12.36□□□□□ -0.43
DUBR-202ENST00000466734 MYT1Q01538 1121 aa12.33□□□□□ -0.44
DUBR-202ENST00000466734 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
DUBR-202ENST00000466734 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
DUBR-202ENST00000466734 NACADO15069 1562 aa12.28□□□□□ -0.44
DUBR-202ENST00000466734 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
DUBR-202ENST00000466734 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
DUBR-202ENST00000466734 WIZO95785 1651 aa12.19□□□□□ -0.46
DUBR-202ENST00000466734 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
DUBR-202ENST00000466734 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
DUBR-202ENST00000466734 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
DUBR-202ENST00000466734 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
DUBR-202ENST00000466734 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
DUBR-202ENST00000466734 SOGA1O94964 1423 aa11.91□□□□□ -0.5
DUBR-202ENST00000466734 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
DUBR-202ENST00000466734 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
DUBR-202ENST00000466734 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
DUBR-202ENST00000466734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
DUBR-202ENST00000466734 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
DUBR-202ENST00000466734 SMARCA2P51531 1590 aa11.87□□□□□ -0.51
DUBR-202ENST00000466734 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
DUBR-202ENST00000466734 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
DUBR-202ENST00000466734 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
DUBR-202ENST00000466734 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
DUBR-202ENST00000466734 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
DUBR-202ENST00000466734 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
DUBR-202ENST00000466734 CEP162Q5TB80 1403 aa11.76□□□□□ -0.53
DUBR-202ENST00000466734 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
DUBR-202ENST00000466734 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
DUBR-202ENST00000466734 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
DUBR-202ENST00000466734 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
DUBR-202ENST00000466734 BAZ1BQ9UIG0 1483 aaKnown RBP11.69□□□□□ -0.54
DUBR-202ENST00000466734 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
DUBR-202ENST00000466734 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
DUBR-202ENST00000466734 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
DUBR-202ENST00000466734 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
DUBR-202ENST00000466734 EEA1Q15075 1411 aa11.6□□□□□ -0.55
DUBR-202ENST00000466734 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
DUBR-202ENST00000466734 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
DUBR-202ENST00000466734 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
DUBR-202ENST00000466734 APLP2Q06481 763 aa11.57□□□□□ -0.56
DUBR-202ENST00000466734 CLIP1P30622 1438 aa11.56□□□□□ -0.56
DUBR-202ENST00000466734 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
DUBR-202ENST00000466734 DIEXFQ68CQ4 756 aaKnown RBP11.5□□□□□ -0.57
DUBR-202ENST00000466734 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
DUBR-202ENST00000466734 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.58
DUBR-202ENST00000466734 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
DUBR-202ENST00000466734 ERICH6Q7L0X2 663 aa11.45□□□□□ -0.58
DUBR-202ENST00000466734 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
DUBR-202ENST00000466734 ITGAEP38570 1179 aa11.43□□□□□ -0.58
DUBR-202ENST00000466734 KIF21BO75037 1637 aa11.41□□□□□ -0.58
DUBR-202ENST00000466734 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
DUBR-202ENST00000466734 CUX1P39880 1505 aa11.41□□□□□ -0.58
DUBR-202ENST00000466734 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
DUBR-202ENST00000466734 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
DUBR-202ENST00000466734 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
DUBR-202ENST00000466734 ATP1B4Q9UN42 357 aaPredicted RBP11.37□□□□□ -0.59
DUBR-202ENST00000466734 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
DUBR-202ENST00000466734 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
DUBR-202ENST00000466734 CFTRP13569 1480 aa11.37□□□□□ -0.59
DUBR-202ENST00000466734 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
DUBR-202ENST00000466734 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
DUBR-202ENST00000466734 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
DUBR-202ENST00000466734 ARAP1Q96P48 1450 aa11.33□□□□□ -0.6
DUBR-202ENST00000466734 CUX2O14529 1486 aa11.32□□□□□ -0.6
DUBR-202ENST00000466734 IGF1RP08069 1367 aa11.32□□□□□ -0.6
DUBR-202ENST00000466734 CADPSQ9ULU8 1353 aa11.32□□□□□ -0.6
DUBR-202ENST00000466734 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
DUBR-202ENST00000466734 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
DUBR-202ENST00000466734 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
DUBR-202ENST00000466734 MIER1Q8N108 512 aa11.3□□□□□ -0.6
DUBR-202ENST00000466734 BIVM-ERCC5R4GMW8 1640 aa11.3□□□□□ -0.6
DUBR-202ENST00000466734 CARMIL1Q5VZK9 1371 aa11.27□□□□□ -0.61
DUBR-202ENST00000466734 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
DUBR-202ENST00000466734 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
DUBR-202ENST00000466734 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
DUBR-202ENST00000466734 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
DUBR-202ENST00000466734 NESP48681 1621 aa11.23□□□□□ -0.61
DUBR-202ENST00000466734 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms