RNA–Protein interactions for RNA: ENST00000580912.2

RN7SL237P-201, Transcript of RNA, 7SL, cytoplasmic 237, pseudogene, humanhuman

BASIC

Gene RN7SL237P, Length 287 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL237P-201ENST00000580912 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
RN7SL237P-201ENST00000580912 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
RN7SL237P-201ENST00000580912 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
RN7SL237P-201ENST00000580912 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
RN7SL237P-201ENST00000580912 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
RN7SL237P-201ENST00000580912 FOXD1Q16676 465 aa17.92■□□□□ 0.46
RN7SL237P-201ENST00000580912 ABCC9O60706 1549 aa17.04■□□□□ 0.32
RN7SL237P-201ENST00000580912 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
RN7SL237P-201ENST00000580912 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
RN7SL237P-201ENST00000580912 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
RN7SL237P-201ENST00000580912 MSH5O43196 834 aa16.66■□□□□ 0.26
RN7SL237P-201ENST00000580912 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
RN7SL237P-201ENST00000580912 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
RN7SL237P-201ENST00000580912 ADRA2BP18089 450 aa16.58■□□□□ 0.24
RN7SL237P-201ENST00000580912 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
RN7SL237P-201ENST00000580912 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
RN7SL237P-201ENST00000580912 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
RN7SL237P-201ENST00000580912 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
RN7SL237P-201ENST00000580912 NACADO15069 1562 aa15.89■□□□□ 0.13
RN7SL237P-201ENST00000580912 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
RN7SL237P-201ENST00000580912 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
RN7SL237P-201ENST00000580912 BICRAQ9NZM4 1560 aa15.52■□□□□ 0.07
RN7SL237P-201ENST00000580912 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.07
RN7SL237P-201ENST00000580912 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
RN7SL237P-201ENST00000580912 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
RN7SL237P-201ENST00000580912 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
RN7SL237P-201ENST00000580912 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
RN7SL237P-201ENST00000580912 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
RN7SL237P-201ENST00000580912 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
RN7SL237P-201ENST00000580912 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
RN7SL237P-201ENST00000580912 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
RN7SL237P-201ENST00000580912 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
RN7SL237P-201ENST00000580912 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
RN7SL237P-201ENST00000580912 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
RN7SL237P-201ENST00000580912 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
RN7SL237P-201ENST00000580912 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
RN7SL237P-201ENST00000580912 ATAD2BQ9ULI0 1458 aa14.68□□□□□ -0.06
RN7SL237P-201ENST00000580912 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
RN7SL237P-201ENST00000580912 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
RN7SL237P-201ENST00000580912 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
RN7SL237P-201ENST00000580912 NESP48681 1621 aa14.58□□□□□ -0.08
RN7SL237P-201ENST00000580912 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
RN7SL237P-201ENST00000580912 CUX2O14529 1486 aa14.57□□□□□ -0.08
RN7SL237P-201ENST00000580912 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
RN7SL237P-201ENST00000580912 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
RN7SL237P-201ENST00000580912 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
RN7SL237P-201ENST00000580912 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
RN7SL237P-201ENST00000580912 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
RN7SL237P-201ENST00000580912 PDS5BQ9NTI5 1447 aa14.39□□□□□ -0.11
RN7SL237P-201ENST00000580912 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
RN7SL237P-201ENST00000580912 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
RN7SL237P-201ENST00000580912 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
RN7SL237P-201ENST00000580912 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
RN7SL237P-201ENST00000580912 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
RN7SL237P-201ENST00000580912 RNF39Q9H2S5 420 aa14.32□□□□□ -0.12
RN7SL237P-201ENST00000580912 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
RN7SL237P-201ENST00000580912 WIZO95785 1651 aa14.3□□□□□ -0.12
RN7SL237P-201ENST00000580912 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
RN7SL237P-201ENST00000580912 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
RN7SL237P-201ENST00000580912 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
RN7SL237P-201ENST00000580912 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
RN7SL237P-201ENST00000580912 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
RN7SL237P-201ENST00000580912 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
RN7SL237P-201ENST00000580912 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
RN7SL237P-201ENST00000580912 WDR62O43379 1518 aa14.1□□□□□ -0.15
RN7SL237P-201ENST00000580912 CFTRP13569 1480 aa14.08□□□□□ -0.16
RN7SL237P-201ENST00000580912 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
RN7SL237P-201ENST00000580912 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
RN7SL237P-201ENST00000580912 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
RN7SL237P-201ENST00000580912 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
RN7SL237P-201ENST00000580912 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
RN7SL237P-201ENST00000580912 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
RN7SL237P-201ENST00000580912 FBLN2P98095 1184 aa13.95□□□□□ -0.18
RN7SL237P-201ENST00000580912 SUPT5HO00267 1087 aaKnown RBP13.9□□□□□ -0.18
RN7SL237P-201ENST00000580912 ZNF608Q9ULD9 1512 aaPredicted RBP13.89□□□□□ -0.19
RN7SL237P-201ENST00000580912 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
RN7SL237P-201ENST00000580912 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
RN7SL237P-201ENST00000580912 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
RN7SL237P-201ENST00000580912 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.2
RN7SL237P-201ENST00000580912 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
RN7SL237P-201ENST00000580912 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
RN7SL237P-201ENST00000580912 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
RN7SL237P-201ENST00000580912 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
RN7SL237P-201ENST00000580912 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
RN7SL237P-201ENST00000580912 SOGA1O94964 1423 aa13.75□□□□□ -0.21
RN7SL237P-201ENST00000580912 RIMBP3CA6NJZ7 1639 aa13.75□□□□□ -0.21
RN7SL237P-201ENST00000580912 RIMBP3BA6NNM3 1639 aa13.75□□□□□ -0.21
RN7SL237P-201ENST00000580912 RIMBP3Q9UFD9 1639 aa13.75□□□□□ -0.21
RN7SL237P-201ENST00000580912 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
RN7SL237P-201ENST00000580912 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
RN7SL237P-201ENST00000580912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
RN7SL237P-201ENST00000580912 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
RN7SL237P-201ENST00000580912 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
RN7SL237P-201ENST00000580912 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
RN7SL237P-201ENST00000580912 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
RN7SL237P-201ENST00000580912 FGD5Q6ZNL6 1462 aa13.65□□□□□ -0.22
RN7SL237P-201ENST00000580912 CHD1O14646 1710 aa13.64□□□□□ -0.23
RN7SL237P-201ENST00000580912 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
RN7SL237P-201ENST00000580912 KCNA4P22459 653 aa13.6□□□□□ -0.23
RN7SL237P-201ENST00000580912 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms