RNA–Protein interactions for RNA: ENST00000414461.6

RBFOX2-207, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-207ENST00000414461 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
RBFOX2-207ENST00000414461 POTEDQ86YR6 584 aa21.52■■□□□ 1.03
RBFOX2-207ENST00000414461 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
RBFOX2-207ENST00000414461 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
RBFOX2-207ENST00000414461 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
RBFOX2-207ENST00000414461 FOXD1Q16676 465 aa18.43■□□□□ 0.54
RBFOX2-207ENST00000414461 MSH5O43196 834 aa18.31■□□□□ 0.52
RBFOX2-207ENST00000414461 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
RBFOX2-207ENST00000414461 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
RBFOX2-207ENST00000414461 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
RBFOX2-207ENST00000414461 POTEHQ6S545 545 aa16.45■□□□□ 0.22
RBFOX2-207ENST00000414461 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
RBFOX2-207ENST00000414461 ABCC9O60706 1549 aa16.15■□□□□ 0.18
RBFOX2-207ENST00000414461 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
RBFOX2-207ENST00000414461 ADRA2BP18089 450 aa16.02■□□□□ 0.15
RBFOX2-207ENST00000414461 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.15
RBFOX2-207ENST00000414461 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
RBFOX2-207ENST00000414461 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
RBFOX2-207ENST00000414461 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
RBFOX2-207ENST00000414461 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
RBFOX2-207ENST00000414461 NACADO15069 1562 aa15.25■□□□□ 0.03
RBFOX2-207ENST00000414461 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
RBFOX2-207ENST00000414461 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
RBFOX2-207ENST00000414461 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
RBFOX2-207ENST00000414461 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
RBFOX2-207ENST00000414461 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
RBFOX2-207ENST00000414461 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
RBFOX2-207ENST00000414461 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
RBFOX2-207ENST00000414461 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
RBFOX2-207ENST00000414461 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
RBFOX2-207ENST00000414461 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
RBFOX2-207ENST00000414461 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
RBFOX2-207ENST00000414461 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
RBFOX2-207ENST00000414461 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
RBFOX2-207ENST00000414461 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
RBFOX2-207ENST00000414461 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
RBFOX2-207ENST00000414461 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
RBFOX2-207ENST00000414461 PLSCR2Q9NRY7 297 aa14.53□□□□□ -0.08
RBFOX2-207ENST00000414461 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
RBFOX2-207ENST00000414461 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
RBFOX2-207ENST00000414461 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
RBFOX2-207ENST00000414461 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
RBFOX2-207ENST00000414461 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
RBFOX2-207ENST00000414461 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
RBFOX2-207ENST00000414461 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
RBFOX2-207ENST00000414461 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
RBFOX2-207ENST00000414461 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
RBFOX2-207ENST00000414461 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.16
RBFOX2-207ENST00000414461 HMGXB3Q12766 1538 aa14.02□□□□□ -0.17
RBFOX2-207ENST00000414461 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
RBFOX2-207ENST00000414461 WIZO95785 1651 aa14□□□□□ -0.17
RBFOX2-207ENST00000414461 CUX2O14529 1486 aa13.97□□□□□ -0.17
RBFOX2-207ENST00000414461 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
RBFOX2-207ENST00000414461 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
RBFOX2-207ENST00000414461 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
RBFOX2-207ENST00000414461 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
RBFOX2-207ENST00000414461 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
RBFOX2-207ENST00000414461 NESP48681 1621 aa13.84□□□□□ -0.19
RBFOX2-207ENST00000414461 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
RBFOX2-207ENST00000414461 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
RBFOX2-207ENST00000414461 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
RBFOX2-207ENST00000414461 LAMC3Q9Y6N6 1575 aa13.73□□□□□ -0.21
RBFOX2-207ENST00000414461 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
RBFOX2-207ENST00000414461 CADPSQ9ULU8 1353 aa13.67□□□□□ -0.22
RBFOX2-207ENST00000414461 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
RBFOX2-207ENST00000414461 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
RBFOX2-207ENST00000414461 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
RBFOX2-207ENST00000414461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.23
RBFOX2-207ENST00000414461 CFTRP13569 1480 aa13.6□□□□□ -0.23
RBFOX2-207ENST00000414461 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
RBFOX2-207ENST00000414461 DSG3P32926 999 aa13.55□□□□□ -0.24
RBFOX2-207ENST00000414461 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
RBFOX2-207ENST00000414461 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
RBFOX2-207ENST00000414461 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
RBFOX2-207ENST00000414461 WDR62O43379 1518 aa13.51□□□□□ -0.25
RBFOX2-207ENST00000414461 LHX8Q68G74 356 aa13.47□□□□□ -0.25
RBFOX2-207ENST00000414461 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
RBFOX2-207ENST00000414461 URB2Q14146 1524 aaKnown RBP13.41□□□□□ -0.26
RBFOX2-207ENST00000414461 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
RBFOX2-207ENST00000414461 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
RBFOX2-207ENST00000414461 CAPN15O75808 1086 aa13.3□□□□□ -0.28
RBFOX2-207ENST00000414461 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
RBFOX2-207ENST00000414461 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
RBFOX2-207ENST00000414461 CUX1P39880 1505 aa13.25□□□□□ -0.29
RBFOX2-207ENST00000414461 HRCP23327 699 aa13.23□□□□□ -0.29
RBFOX2-207ENST00000414461 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
RBFOX2-207ENST00000414461 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
RBFOX2-207ENST00000414461 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
RBFOX2-207ENST00000414461 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
RBFOX2-207ENST00000414461 HAX1O00165 279 aa13.22□□□□□ -0.29
RBFOX2-207ENST00000414461 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.3
RBFOX2-207ENST00000414461 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
RBFOX2-207ENST00000414461 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
RBFOX2-207ENST00000414461 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
RBFOX2-207ENST00000414461 SOGA1O94964 1423 aa13.17□□□□□ -0.3
RBFOX2-207ENST00000414461 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
RBFOX2-207ENST00000414461 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
RBFOX2-207ENST00000414461 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
RBFOX2-207ENST00000414461 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
RBFOX2-207ENST00000414461 TARBP1Q13395 1621 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms