RNA–Protein interactions for RNA: ENST00000416890.5

LINC00222-203, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best) BASIC

Gene LINC00222, Length 602 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-203ENST00000416890 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
LINC00222-203ENST00000416890 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
LINC00222-203ENST00000416890 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
LINC00222-203ENST00000416890 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
LINC00222-203ENST00000416890 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
LINC00222-203ENST00000416890 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
LINC00222-203ENST00000416890 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
LINC00222-203ENST00000416890 SUPT5HO00267 1087 aaKnown RBP13.11□□□□□ -0.31
LINC00222-203ENST00000416890 NACADO15069 1562 aa12.87□□□□□ -0.35
LINC00222-203ENST00000416890 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
LINC00222-203ENST00000416890 ABCC9O60706 1549 aa12.77□□□□□ -0.37
LINC00222-203ENST00000416890 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
LINC00222-203ENST00000416890 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
LINC00222-203ENST00000416890 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
LINC00222-203ENST00000416890 BAZ1AQ9NRL2 1556 aaPredicted RBP12.44□□□□□ -0.42
LINC00222-203ENST00000416890 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
LINC00222-203ENST00000416890 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
LINC00222-203ENST00000416890 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
LINC00222-203ENST00000416890 WIZO95785 1651 aa12.27□□□□□ -0.45
LINC00222-203ENST00000416890 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
LINC00222-203ENST00000416890 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
LINC00222-203ENST00000416890 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
LINC00222-203ENST00000416890 HRCP23327 699 aa12.19□□□□□ -0.46
LINC00222-203ENST00000416890 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
LINC00222-203ENST00000416890 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
LINC00222-203ENST00000416890 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
LINC00222-203ENST00000416890 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
LINC00222-203ENST00000416890 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
LINC00222-203ENST00000416890 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
LINC00222-203ENST00000416890 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
LINC00222-203ENST00000416890 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
LINC00222-203ENST00000416890 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00222-203ENST00000416890 EEA1Q15075 1411 aa12.08□□□□□ -0.48
LINC00222-203ENST00000416890 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
LINC00222-203ENST00000416890 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
LINC00222-203ENST00000416890 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
LINC00222-203ENST00000416890 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
LINC00222-203ENST00000416890 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
LINC00222-203ENST00000416890 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
LINC00222-203ENST00000416890 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
LINC00222-203ENST00000416890 ABCC8Q09428 1581 aa11.91□□□□□ -0.5
LINC00222-203ENST00000416890 NCAPD3P42695 1498 aa11.9□□□□□ -0.5
LINC00222-203ENST00000416890 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
LINC00222-203ENST00000416890 SOGA1O94964 1423 aa11.85□□□□□ -0.51
LINC00222-203ENST00000416890 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
LINC00222-203ENST00000416890 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
LINC00222-203ENST00000416890 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
LINC00222-203ENST00000416890 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
LINC00222-203ENST00000416890 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
LINC00222-203ENST00000416890 KIF21BO75037 1637 aa11.75□□□□□ -0.53
LINC00222-203ENST00000416890 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
LINC00222-203ENST00000416890 TOP2BQ02880 1626 aa11.74□□□□□ -0.53
LINC00222-203ENST00000416890 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
LINC00222-203ENST00000416890 CFTRP13569 1480 aa11.72□□□□□ -0.53
LINC00222-203ENST00000416890 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
LINC00222-203ENST00000416890 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
LINC00222-203ENST00000416890 CLIP1P30622 1438 aa11.66□□□□□ -0.54
LINC00222-203ENST00000416890 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.55
LINC00222-203ENST00000416890 KIF27Q86VH2 1401 aa11.64□□□□□ -0.55
LINC00222-203ENST00000416890 APLP2Q06481 763 aa11.63□□□□□ -0.55
LINC00222-203ENST00000416890 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
LINC00222-203ENST00000416890 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
LINC00222-203ENST00000416890 VPS8Q8N3P4 1428 aa11.61□□□□□ -0.55
LINC00222-203ENST00000416890 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
LINC00222-203ENST00000416890 CCER1Q8TC90 406 aaPredicted RBP11.58□□□□□ -0.56
LINC00222-203ENST00000416890 CUX1P39880 1505 aa11.58□□□□□ -0.56
LINC00222-203ENST00000416890 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
LINC00222-203ENST00000416890 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
LINC00222-203ENST00000416890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
LINC00222-203ENST00000416890 IGF1RP08069 1367 aa11.47□□□□□ -0.57
LINC00222-203ENST00000416890 CUX2O14529 1486 aa11.44□□□□□ -0.58
LINC00222-203ENST00000416890 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
LINC00222-203ENST00000416890 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
LINC00222-203ENST00000416890 CLSPNQ9HAW4 1339 aa11.42□□□□□ -0.58
LINC00222-203ENST00000416890 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
LINC00222-203ENST00000416890 ARAP1Q96P48 1450 aa11.42□□□□□ -0.58
LINC00222-203ENST00000416890 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
LINC00222-203ENST00000416890 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
LINC00222-203ENST00000416890 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
LINC00222-203ENST00000416890 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
LINC00222-203ENST00000416890 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
LINC00222-203ENST00000416890 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
LINC00222-203ENST00000416890 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
LINC00222-203ENST00000416890 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
LINC00222-203ENST00000416890 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
LINC00222-203ENST00000416890 TOPBP1Q92547 1522 aa11.35□□□□□ -0.59
LINC00222-203ENST00000416890 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
LINC00222-203ENST00000416890 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
LINC00222-203ENST00000416890 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
LINC00222-203ENST00000416890 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
LINC00222-203ENST00000416890 CUL7Q14999 1698 aa11.3□□□□□ -0.6
LINC00222-203ENST00000416890 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
LINC00222-203ENST00000416890 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
LINC00222-203ENST00000416890 CCNB3Q8WWL7 1395 aa11.28□□□□□ -0.6
LINC00222-203ENST00000416890 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
LINC00222-203ENST00000416890 AQRO60306 1485 aaKnown RBP eCLIP11.27□□□□□ -0.6
LINC00222-203ENST00000416890 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
LINC00222-203ENST00000416890 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
LINC00222-203ENST00000416890 NESP48681 1621 aa11.24□□□□□ -0.61
LINC00222-203ENST00000416890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms