Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AC099791.1-201ENST00000416440 715 ntBASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 AC027702.1-201ENST00000563810 1770 ntBASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C12orf4Q9NQ89 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 AC020907.5-201ENST00000624372 1936 ntBASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C12orf4Q9NQ89 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C12orf4Q9NQ89 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms