Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 HTR7P1-202ENST00000624664 4411 ntBASIC19.2■□□□□ 0.66
VCX3BQ9H321 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.2■□□□□ 0.66
VCX3BQ9H321 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
VCX3BQ9H321 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.19■□□□□ 0.66
VCX3BQ9H321 OR6D1P-202ENST00000641007 5290 ntBASIC19.19■□□□□ 0.66
VCX3BQ9H321 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
VCX3BQ9H321 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
VCX3BQ9H321 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCX3BQ9H321 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.19■□□□□ 0.66
VCX3BQ9H321 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VCX3BQ9H321 AL138781.2-201ENST00000617896 1843 ntBASIC19.18■□□□□ 0.66
VCX3BQ9H321 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCX3BQ9H321 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 AL451085.2-201ENST00000605085 799 ntBASIC19.17■□□□□ 0.66
VCX3BQ9H321 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.17■□□□□ 0.66
VCX3BQ9H321 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VCX3BQ9H321 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 PKD1P1-201ENST00000458669 6805 ntBASIC19.16■□□□□ 0.66
VCX3BQ9H321 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
VCX3BQ9H321 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.16■□□□□ 0.66
VCX3BQ9H321 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.16■□□□□ 0.66
VCX3BQ9H321 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VCX3BQ9H321 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms