Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 C1orf229-201ENST00000623686 2258 ntBASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 SLC25A3P1-201ENST00000443844 931 ntBASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 AC073508.3-201ENST00000619697 1419 ntBASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 AC010947.1-201ENST00000623454 693 ntBASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NECTIN4Q96NY8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.95■□□□□ 0.95
NECTIN4Q96NY8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 NIFKP9-201ENST00000419265 221 ntBASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 KRT16P1-201ENST00000399124 1418 ntBASIC20.95■□□□□ 0.94
NECTIN4Q96NY8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 CYP2D8P-201ENST00000433633 1490 ntBASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 AC011484.1-201ENST00000377652 1995 ntBASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 DUX4L26-201ENST00000489078 1255 ntBASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 CR392000.1-201ENST00000624770 1228 ntBASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NECTIN4Q96NY8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 AL390955.1-201ENST00000428694 934 ntBASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
NECTIN4Q96NY8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 NTF6B-201ENST00000591913 560 ntBASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms