Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PGBD3Q8N328 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD3Q8N328 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD3Q8N328 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD3Q8N328 KRT17P2-201ENST00000300992 1314 ntBASIC20.5■□□□□ 0.87
PGBD3Q8N328 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD3Q8N328 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD3Q8N328 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 AC211429.1-201ENST00000415277 523 ntBASIC20.49■□□□□ 0.87
PGBD3Q8N328 AC012618.2-201ENST00000428058 849 ntBASIC20.49■□□□□ 0.87
PGBD3Q8N328 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 AP001412.1-201ENST00000608405 714 ntBASIC20.49■□□□□ 0.87
PGBD3Q8N328 AC110285.5-201ENST00000611501 352 ntBASIC20.49■□□□□ 0.87
PGBD3Q8N328 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.49■□□□□ 0.87
PGBD3Q8N328 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PGBD3Q8N328 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD3Q8N328 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD3Q8N328 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD3Q8N328 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD3Q8N328 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD3Q8N328 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 AC233702.5-201ENST00000584107 538 ntBASIC20.48■□□□□ 0.87
PGBD3Q8N328 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PGBD3Q8N328 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD3Q8N328 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.47■□□□□ 0.87
PGBD3Q8N328 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.47■□□□□ 0.87
PGBD3Q8N328 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD3Q8N328 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 PRKY-204ENST00000533551 1019 ntBASIC20.46■□□□□ 0.87
PGBD3Q8N328 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 AL024507.2-201ENST00000606070 2574 ntBASIC20.46■□□□□ 0.87
PGBD3Q8N328 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.46■□□□□ 0.87
PGBD3Q8N328 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD3Q8N328 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PGBD3Q8N328 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 AC133681.1-201ENST00000465482 601 ntBASIC20.45■□□□□ 0.86
PGBD3Q8N328 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
PGBD3Q8N328 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PGBD3Q8N328 LINC01023-201ENST00000606054 436 ntBASIC20.45■□□□□ 0.86
PGBD3Q8N328 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms