Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PACS2Q86VP3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 AL138781.2-201ENST00000617896 1843 ntBASIC20.2■□□□□ 0.82
PACS2Q86VP3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PACS2Q86VP3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.19■□□□□ 0.82
PACS2Q86VP3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PACS2Q86VP3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.19■□□□□ 0.82
PACS2Q86VP3 OR2I1P-207ENST00000453522 948 ntBASIC20.19■□□□□ 0.82
PACS2Q86VP3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.19■□□□□ 0.82
PACS2Q86VP3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PACS2Q86VP3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 AC004687.1-201ENST00000579003 1625 ntBASIC20.18■□□□□ 0.82
PACS2Q86VP3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PACS2Q86VP3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.18■□□□□ 0.82
PACS2Q86VP3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.17■□□□□ 0.82
PACS2Q86VP3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS2Q86VP3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS2Q86VP3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 AC105265.2-201ENST00000467189 838 ntBASIC20.16■□□□□ 0.82
PACS2Q86VP3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS2Q86VP3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
PACS2Q86VP3 AC007225.1-201ENST00000566331 1836 ntBASIC20.16■□□□□ 0.82
PACS2Q86VP3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.15■□□□□ 0.82
PACS2Q86VP3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PACS2Q86VP3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PACS2Q86VP3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms