Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 AC211429.1-201ENST00000415277 523 ntBASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 AC073912.3-201ENST00000624414 853 ntBASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SHROOM1Q2M3G4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHROOM1Q2M3G4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHROOM1Q2M3G4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHROOM1Q2M3G4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.64■■□□□ 1.38
SHROOM1Q2M3G4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 AC023632.3-201ENST00000521633 145 ntBASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHROOM1Q2M3G4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHROOM1Q2M3G4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 BX088651.1-201ENST00000540551 451 ntBASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.62■■□□□ 1.37
SHROOM1Q2M3G4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHROOM1Q2M3G4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 PRKY-204ENST00000533551 1019 ntBASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.6■■□□□ 1.37
SHROOM1Q2M3G4 REXO1L12P-201ENST00000622156 912 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms