Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDH17Q12864 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.39■□□□□ 0.86
CDH17Q12864 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH17Q12864 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CDH17Q12864 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH17Q12864 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH17Q12864 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH17Q12864 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH17Q12864 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH17Q12864 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH17Q12864 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH17Q12864 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CDH17Q12864 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH17Q12864 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH17Q12864 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDH17Q12864 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH17Q12864 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH17Q12864 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH17Q12864 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH17Q12864 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH17Q12864 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH17Q12864 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH17Q12864 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH17Q12864 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDH17Q12864 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CDH17Q12864 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH17Q12864 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH17Q12864 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH17Q12864 OR10C1-204ENST00000622521 1039 ntBASIC20.37■□□□□ 0.85
CDH17Q12864 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH17Q12864 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH17Q12864 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH17Q12864 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH17Q12864 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH17Q12864 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH17Q12864 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDH17Q12864 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CDH17Q12864 KRT18P68-201ENST00000392293 1000 ntBASIC20.36■□□□□ 0.85
CDH17Q12864 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.36■□□□□ 0.85
CDH17Q12864 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH17Q12864 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH17Q12864 AC105020.6-201ENST00000621523 1217 ntBASIC20.36■□□□□ 0.85
CDH17Q12864 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH17Q12864 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH17Q12864 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDH17Q12864 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH17Q12864 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH17Q12864 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH17Q12864 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH17Q12864 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH17Q12864 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
CDH17Q12864 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDH17Q12864 MIR935-201ENST00000401179 91 ntBASIC20.35■□□□□ 0.85
CDH17Q12864 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH17Q12864 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CDH17Q12864 CYP2T3P-201ENST00000601990 817 ntBASIC20.35■□□□□ 0.85
CDH17Q12864 AC092437.1-201ENST00000624794 1048 ntBASIC20.35■□□□□ 0.85
CDH17Q12864 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH17Q12864 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CDH17Q12864 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH17Q12864 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH17Q12864 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CDH17Q12864 BX119927.1-201ENST00000636596 1552 ntBASIC20.34■□□□□ 0.85
CDH17Q12864 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 AC004911.1-201ENST00000416316 871 ntBASIC20.34■□□□□ 0.85
CDH17Q12864 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CDH17Q12864 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH17Q12864 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH17Q12864 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH17Q12864 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDH17Q12864 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms