Protein–RNA interactions for Protein: Q03790

NUP53, Nucleoporin NUP53, yeastyeast

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP53Q03790 YLR140WYLR140W 327 nt2.08□□□□□ -2.08
NUP53Q03790 RPL38YLR325C 237 nt2.08□□□□□ -2.08
NUP53Q03790 YLR342W-AYLR342W-A 174 nt2.08□□□□□ -2.08
NUP53Q03790 RPS17AYML024W 411 nt2.08□□□□□ -2.08
NUP53Q03790 SCD5YOR329C 2619 nt2.08□□□□□ -2.08
NUP53Q03790 NOP53YPL146C 1368 nt2.08□□□□□ -2.08
NUP53Q03790 UBP15YMR304W 3693 nt2.07□□□□□ -2.08
NUP53Q03790 DFG16YOR030W 1860 nt2.07□□□□□ -2.08
NUP53Q03790 SEC16YPL085W 6588 nt2.07□□□□□ -2.08
NUP53Q03790 SGD1YLR336C 2700 nt2.07□□□□□ -2.08
NUP53Q03790 TAE2YPL009C 3117 nt2.07□□□□□ -2.08
NUP53Q03790 CSF1YLR087C 8877 nt2.07□□□□□ -2.08
NUP53Q03790 MRP10YDL045W-A 288 nt2.07□□□□□ -2.08
NUP53Q03790 YEL014CYEL014C 306 nt2.07□□□□□ -2.08
NUP53Q03790 YLR255CYLR255C 354 nt2.07□□□□□ -2.08
NUP53Q03790 YNL205CYNL205C 423 nt2.07□□□□□ -2.08
NUP53Q03790 SSQ1YLR369W 1974 nt2.07□□□□□ -2.08
NUP53Q03790 TOR2YKL203C 7425 nt2.07□□□□□ -2.08
NUP53Q03790 HSL1YKL101W 4557 nt2.07□□□□□ -2.08
NUP53Q03790 ESL2YKR096W 3588 nt2.06□□□□□ -2.08
NUP53Q03790 SDH6YDR379C-A 240 nt2.06□□□□□ -2.08
NUP53Q03790 YGL217CYGL217C 342 nt2.06□□□□□ -2.08
NUP53Q03790 SMD1YGR074W 441 nt2.06□□□□□ -2.08
NUP53Q03790 SRO77YBL106C 3033 nt2.06□□□□□ -2.08
NUP53Q03790 CDC27YBL084C 2277 nt2.06□□□□□ -2.08
NUP53Q03790 TOF2YKR010C 2316 nt2.06□□□□□ -2.08
NUP53Q03790 snR74snR74 88 nt2.05□□□□□ -2.08
NUP53Q03790 OLI1Q0130 231 nt2.05□□□□□ -2.08
NUP53Q03790 NOP10YHR072W-A 177 nt2.05□□□□□ -2.08
NUP53Q03790 YOR333CYOR333C 417 nt2.05□□□□□ -2.08
NUP53Q03790 YPR002C-AYPR002C-A 198 nt2.05□□□□□ -2.08
NUP53Q03790 YBR131C-AYBR131C-A 90 nt2.05□□□□□ -2.08
NUP53Q03790 PDE2YOR360C 1581 nt2.05□□□□□ -2.08
NUP53Q03790 ALK2YBL009W 2031 nt2.05□□□□□ -2.08
NUP53Q03790 LCD1YDR499W 2244 nt2.04□□□□□ -2.08
NUP53Q03790 VPS55YJR044C 423 nt2.04□□□□□ -2.08
NUP53Q03790 YBR224WYBR224W 516 nt2.04□□□□□ -2.08
NUP53Q03790 MLH1YMR167W 2310 nt2.03□□□□□ -2.08
NUP53Q03790 YLR149CYLR149C 2193 nt2.03□□□□□ -2.08
NUP53Q03790 CLN3YAL040C 1743 nt2.03□□□□□ -2.08
NUP53Q03790 VMR1YHL035C 4779 nt2.03□□□□□ -2.08
NUP53Q03790 SNC1YAL030W 354 nt2.03□□□□□ -2.08
NUP53Q03790 YNL097C-BYNL097C-B 123 nt2.03□□□□□ -2.08
NUP53Q03790 SNC2YOR327C 348 nt2.03□□□□□ -2.08
NUP53Q03790 PEX8YGR077C 1770 nt2.03□□□□□ -2.09
NUP53Q03790 PUT3YKL015W 2940 nt2.02□□□□□ -2.09
NUP53Q03790 VPS34YLR240W 2628 nt2.02□□□□□ -2.09
NUP53Q03790 YLR154W-AYLR154W-A 186 nt2.02□□□□□ -2.09
NUP53Q03790 YPR092WYPR092W 306 nt2.02□□□□□ -2.09
NUP53Q03790 USO1YDL058W 5373 nt2.02□□□□□ -2.09
NUP53Q03790 MPT5YGL178W 2580 nt2.02□□□□□ -2.09
NUP53Q03790 CFT2YLR115W 2580 nt2.02□□□□□ -2.09
NUP53Q03790 SAP190YKR028W 3102 nt2.01□□□□□ -2.09
NUP53Q03790 PLC1YPL268W 2610 nt2.01□□□□□ -2.09
NUP53Q03790 PXA2YKL188C 2562 nt2.01□□□□□ -2.09
NUP53Q03790 VPS54YDR027C 2670 nt2□□□□□ -2.09
NUP53Q03790 SPT21YMR179W 2277 nt2□□□□□ -2.09
NUP53Q03790 TRX1YLR043C 312 nt2□□□□□ -2.09
NUP53Q03790 TOF1YNL273W 3717 nt1.99□□□□□ -2.09
NUP53Q03790 SEF1YBL066C 3447 nt1.99□□□□□ -2.09
NUP53Q03790 MUK1YPL070W 1839 nt1.99□□□□□ -2.09
NUP53Q03790 KOG1YHR186C 4674 nt1.99□□□□□ -2.09
NUP53Q03790 RRT15YLR162W-A 189 nt1.99□□□□□ -2.09
NUP53Q03790 snR48snR48 113 nt1.99□□□□□ -2.09
NUP53Q03790 AFI1YOR129C 2682 nt1.99□□□□□ -2.09
NUP53Q03790 GRR1YJR090C 3456 nt1.98□□□□□ -2.09
NUP53Q03790 SEC5YDR166C 2916 nt1.98□□□□□ -2.09
NUP53Q03790 STB4YMR019W 2850 nt1.98□□□□□ -2.09
NUP53Q03790 BRP1YGL007W 378 nt1.98□□□□□ -2.09
NUP53Q03790 YIL020C-AYIL020C-A 339 nt1.98□□□□□ -2.09
NUP53Q03790 YBL083CYBL083C 426 nt1.98□□□□□ -2.09
NUP53Q03790 YBR182C-AYBR182C-A 195 nt1.98□□□□□ -2.09
NUP53Q03790 snR52snR52 92 nt1.98□□□□□ -2.09
NUP53Q03790 EFR3YMR212C 2349 nt1.98□□□□□ -2.09
NUP53Q03790 YMR045CYMR045C 5268 nt1.98□□□□□ -2.09
NUP53Q03790 YPR097WYPR097W 3222 nt1.98□□□□□ -2.09
NUP53Q03790 SPF1YEL031W 3648 nt1.98□□□□□ -2.09
NUP53Q03790 SPO22YIL073C 2928 nt1.97□□□□□ -2.09
NUP53Q03790 snR72snR72 98 nt1.97□□□□□ -2.09
NUP53Q03790 snR85snR85 171 nt1.97□□□□□ -2.09
NUP53Q03790 YDR286CYDR286C 345 nt1.97□□□□□ -2.09
NUP53Q03790 EMP24YGL200C 612 nt1.97□□□□□ -2.09
NUP53Q03790 RPL42BYHR141C 321 nt1.97□□□□□ -2.09
NUP53Q03790 RPL42AYNL162W 321 nt1.97□□□□□ -2.09
NUP53Q03790 YOR376WYOR376W 369 nt1.97□□□□□ -2.09
NUP53Q03790 YOR394C-AYOR394C-A 168 nt1.97□□□□□ -2.09
NUP53Q03790 VMA9YCL005W-A 222 nt1.97□□□□□ -2.09
NUP53Q03790 VPH1YOR270C 2523 nt1.97□□□□□ -2.09
NUP53Q03790 YHR214C-BYHR214C-B 5382 nt1.97□□□□□ -2.09
NUP53Q03790 UTP22YGR090W 3714 nt1.96□□□□□ -2.09
NUP53Q03790 YKL165C-AYKL165C-A 234 nt1.96□□□□□ -2.1
NUP53Q03790 SSD1YDR293C 3753 nt1.96□□□□□ -2.1
NUP53Q03790 CHC1YGL206C 4962 nt1.96□□□□□ -2.1
NUP53Q03790 SVL3YPL032C 2478 nt1.96□□□□□ -2.1
NUP53Q03790 BPH1YCR032W 6504 nt1.96□□□□□ -2.1
NUP53Q03790 CDC53YDL132W 2448 nt1.96□□□□□ -2.1
NUP53Q03790 PEP3YLR148W 2757 nt1.95□□□□□ -2.1
NUP53Q03790 KAP123YER110C 3342 nt1.95□□□□□ -2.1
NUP53Q03790 YBR184WYBR184W 1572 nt1.95□□□□□ -2.1
NUP53Q03790 YGR164WYGR164W 336 nt1.95□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms