Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDR1P51861 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.97■■□□□ 1.11
CDR1P51861 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.96■■□□□ 1.11
CDR1P51861 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.96■■□□□ 1.11
CDR1P51861 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 MIR4758-201ENST00000577688 71 ntBASIC21.96■■□□□ 1.11
CDR1P51861 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CDR1P51861 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CDR1P51861 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDR1P51861 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDR1P51861 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDR1P51861 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.95■■□□□ 1.1
CDR1P51861 AL157384.1-201ENST00000445995 2473 ntBASIC21.95■■□□□ 1.1
CDR1P51861 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDR1P51861 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.95■■□□□ 1.1
CDR1P51861 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.95■■□□□ 1.1
CDR1P51861 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.95■■□□□ 1.1
CDR1P51861 AC083880.1-201ENST00000608266 535 ntBASIC21.95■■□□□ 1.1
CDR1P51861 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDR1P51861 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.94■■□□□ 1.1
CDR1P51861 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.94■■□□□ 1.1
CDR1P51861 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDR1P51861 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 AL512625.2-201ENST00000417533 625 ntBASIC21.94■■□□□ 1.1
CDR1P51861 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 DUSP5P2-201ENST00000426873 1033 ntBASIC21.94■■□□□ 1.1
CDR1P51861 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.94■■□□□ 1.1
CDR1P51861 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.94■■□□□ 1.1
CDR1P51861 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.94■■□□□ 1.1
CDR1P51861 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.94■■□□□ 1.1
CDR1P51861 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 AC007952.6-201ENST00000573168 2673 ntBASIC21.94■■□□□ 1.1
CDR1P51861 AC003957.1-201ENST00000625108 2673 ntBASIC21.94■■□□□ 1.1
CDR1P51861 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDR1P51861 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.94■■□□□ 1.1
CDR1P51861 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDR1P51861 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 FEM1AP4-201ENST00000443167 1987 ntBASIC21.94■■□□□ 1.1
CDR1P51861 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CDR1P51861 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDR1P51861 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.93■■□□□ 1.1
CDR1P51861 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.93■■□□□ 1.1
CDR1P51861 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.93■■□□□ 1.1
CDR1P51861 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.93■■□□□ 1.1
CDR1P51861 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.93■■□□□ 1.1
CDR1P51861 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.93■■□□□ 1.1
CDR1P51861 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDR1P51861 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDR1P51861 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.92■■□□□ 1.1
CDR1P51861 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
CDR1P51861 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.92■■□□□ 1.1
CDR1P51861 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDR1P51861 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDR1P51861 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDR1P51861 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.92■■□□□ 1.1
CDR1P51861 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDR1P51861 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.92■■□□□ 1.1
CDR1P51861 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDR1P51861 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.92■■□□□ 1.1
CDR1P51861 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDR1P51861 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.92■■□□□ 1.1
CDR1P51861 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CDR1P51861 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CDR1P51861 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.91■■□□□ 1.1
CDR1P51861 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms