Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 TOP2YNL088W 4287 nt2.96□□□□□ -1.94
MSH4P40965 SNU13YEL026W 381 nt2.96□□□□□ -1.94
MSH4P40965 YBR277CYBR277C 402 nt2.96□□□□□ -1.94
MSH4P40965 PRP42YDR235W 1635 nt2.96□□□□□ -1.94
MSH4P40965 INP2YMR163C 2118 nt2.95□□□□□ -1.94
MSH4P40965 RTT10YPL183C 3042 nt2.95□□□□□ -1.94
MSH4P40965 YLL007CYLL007C 1998 nt2.95□□□□□ -1.94
MSH4P40965 RPS29AYLR388W 171 nt2.95□□□□□ -1.94
MSH4P40965 YDR098C-BYDR098C-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YDR210C-DYDR210C-D 5268 nt2.94□□□□□ -1.94
MSH4P40965 YDR316W-BYDR316W-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YDR365W-BYDR365W-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YER138CYER138C 5268 nt2.94□□□□□ -1.94
MSH4P40965 YER160CYER160C 5268 nt2.94□□□□□ -1.94
MSH4P40965 YGR038C-BYGR038C-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YGR161C-DYGR161C-D 5268 nt2.94□□□□□ -1.94
MSH4P40965 YJR027WYJR027W 5268 nt2.94□□□□□ -1.94
MSH4P40965 YLR157C-BYLR157C-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YML039WYML039W 5268 nt2.94□□□□□ -1.94
MSH4P40965 YML045WYML045W 5268 nt2.94□□□□□ -1.94
MSH4P40965 YMR050CYMR050C 5268 nt2.94□□□□□ -1.94
MSH4P40965 YOL103W-BYOL103W-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YBR012W-BYBR012W-B 5271 nt2.94□□□□□ -1.94
MSH4P40965 YOR142W-BYOR142W-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YPL257W-BYPL257W-B 5268 nt2.94□□□□□ -1.94
MSH4P40965 YPR158W-BYPR158W-B 5271 nt2.94□□□□□ -1.94
MSH4P40965 YNL018CYNL018C 1839 nt2.94□□□□□ -1.94
MSH4P40965 CYR1YJL005W 6081 nt2.94□□□□□ -1.94
MSH4P40965 YOR329W-AYOR329W-A 210 nt2.94□□□□□ -1.94
MSH4P40965 ACM1YPL267W 630 nt2.94□□□□□ -1.94
MSH4P40965 VTC3YPL019C 2508 nt2.94□□□□□ -1.94
MSH4P40965 SMC6YLR383W 3345 nt2.94□□□□□ -1.94
MSH4P40965 TRS130YMR218C 3309 nt2.94□□□□□ -1.94
MSH4P40965 FAR11YNL127W 2862 nt2.94□□□□□ -1.94
MSH4P40965 SGM1YJR134C 2124 nt2.93□□□□□ -1.94
MSH4P40965 VPS34YLR240W 2628 nt2.93□□□□□ -1.94
MSH4P40965 KTI11YBL071W-A 249 nt2.93□□□□□ -1.94
MSH4P40965 SRO77YBL106C 3033 nt2.93□□□□□ -1.94
MSH4P40965 YLR149CYLR149C 2193 nt2.93□□□□□ -1.94
MSH4P40965 SEF1YBL066C 3447 nt2.92□□□□□ -1.94
MSH4P40965 TUS1YLR425W 3924 nt2.91□□□□□ -1.94
MSH4P40965 STE11YLR362W 2154 nt2.91□□□□□ -1.94
MSH4P40965 GIS1YDR096W 2685 nt2.91□□□□□ -1.94
MSH4P40965 YEL073CYEL073C 324 nt2.91□□□□□ -1.94
MSH4P40965 ECM12YHR021W-A 456 nt2.91□□□□□ -1.94
MSH4P40965 GRR1YJR090C 3456 nt2.91□□□□□ -1.94
MSH4P40965 YDR003W-AYDR003W-A 123 nt2.9□□□□□ -1.95
MSH4P40965 NOP10YHR072W-A 177 nt2.9□□□□□ -1.95
MSH4P40965 YLR146W-AYLR146W-A 189 nt2.9□□□□□ -1.95
MSH4P40965 YOR218CYOR218C 420 nt2.9□□□□□ -1.95
MSH4P40965 SMY2YBR172C 2223 nt2.9□□□□□ -1.95
MSH4P40965 MPT5YGL178W 2580 nt2.9□□□□□ -1.95
MSH4P40965 RRP12YPL012W 3687 nt2.89□□□□□ -1.95
MSH4P40965 PXA2YKL188C 2562 nt2.89□□□□□ -1.95
MSH4P40965 YKU80YMR106C 1890 nt2.89□□□□□ -1.95
MSH4P40965 YBR184WYBR184W 1572 nt2.89□□□□□ -1.95
MSH4P40965 NUM1YDR150W 8247 nt2.88□□□□□ -1.95
MSH4P40965 NUP170YBL079W 4509 nt2.88□□□□□ -1.95
MSH4P40965 TAE2YPL009C 3117 nt2.88□□□□□ -1.95
MSH4P40965 SMY1YKL079W 1971 nt2.87□□□□□ -1.95
MSH4P40965 PMP1YCR024C-A 123 nt2.87□□□□□ -1.95
MSH4P40965 YHR210CYHR210C 1026 nt2.87□□□□□ -1.95
MSH4P40965 SCP160YJL080C 3669 nt2.87□□□□□ -1.95
MSH4P40965 CLN3YAL040C 1743 nt2.87□□□□□ -1.95
MSH4P40965 RRP6YOR001W 2202 nt2.87□□□□□ -1.95
MSH4P40965 KAP123YER110C 3342 nt2.86□□□□□ -1.95
MSH4P40965 KRE33YNL132W 3171 nt2.86□□□□□ -1.95
MSH4P40965 MLH1YMR167W 2310 nt2.86□□□□□ -1.95
MSH4P40965 NUP100YKL068W 2880 nt2.86□□□□□ -1.95
MSH4P40965 SNF5YBR289W 2718 nt2.86□□□□□ -1.95
MSH4P40965 ATG11YPR049C 3537 nt2.85□□□□□ -1.95
MSH4P40965 MCM10YIL150C 1716 nt2.85□□□□□ -1.95
MSH4P40965 RPL33BYOR234C 324 nt2.85□□□□□ -1.95
MSH4P40965 CDC53YDL132W 2448 nt2.85□□□□□ -1.95
MSH4P40965 SWI6YLR182W 2412 nt2.84□□□□□ -1.95
MSH4P40965 PEP3YLR148W 2757 nt2.84□□□□□ -1.95
MSH4P40965 PSD2YGR170W 3417 nt2.84□□□□□ -1.95
MSH4P40965 RPB10YOR210W 213 nt2.84□□□□□ -1.95
MSH4P40965 AFI1YOR129C 2682 nt2.84□□□□□ -1.96
MSH4P40965 SPF1YEL031W 3648 nt2.83□□□□□ -1.96
MSH4P40965 REV3YPL167C 4515 nt2.83□□□□□ -1.96
MSH4P40965 SIR3YLR442C 2937 nt2.83□□□□□ -1.96
MSH4P40965 UBP1YDL122W 2430 nt2.83□□□□□ -1.96
MSH4P40965 APL5YPL195W 2799 nt2.82□□□□□ -1.96
MSH4P40965 SPO22YIL073C 2928 nt2.82□□□□□ -1.96
MSH4P40965 snR72snR72 98 nt2.82□□□□□ -1.96
MSH4P40965 YLR154W-AYLR154W-A 186 nt2.82□□□□□ -1.96
MSH4P40965 YEF3YLR249W 3135 nt2.82□□□□□ -1.96
MSH4P40965 RPH1YER169W 2391 nt2.81□□□□□ -1.96
MSH4P40965 RIC1YLR039C 3171 nt2.81□□□□□ -1.96
MSH4P40965 YIR044CYIR044C 186 nt2.81□□□□□ -1.96
MSH4P40965 SNC1YAL030W 354 nt2.81□□□□□ -1.96
MSH4P40965 YNL114CYNL114C 372 nt2.81□□□□□ -1.96
MSH4P40965 YOR055WYOR055W 435 nt2.81□□□□□ -1.96
MSH4P40965 YOR345CYOR345C 351 nt2.81□□□□□ -1.96
MSH4P40965 PDR11YIL013C 4236 nt2.8□□□□□ -1.96
MSH4P40965 YIL156W-BYIL156W-B 222 nt2.8□□□□□ -1.96
MSH4P40965 CRM1YGR218W 3255 nt2.8□□□□□ -1.96
MSH4P40965 PHO91YNR013C 2685 nt2.8□□□□□ -1.96
MSH4P40965 ELG1YOR144C 2376 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms