Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 SPO22YIL073C 2928 nt2.74□□□□□ -1.97
RPN3P40016 SGF11YPL047W 300 nt2.73□□□□□ -1.97
RPN3P40016 YPR203WYPR203W 309 nt2.73□□□□□ -1.97
RPN3P40016 SDC25YLL016W 3147 nt2.72□□□□□ -1.97
RPN3P40016 YHR086W-AYHR086W-A 162 nt2.72□□□□□ -1.97
RPN3P40016 YEL043WYEL043W 2871 nt2.72□□□□□ -1.97
RPN3P40016 JSN1YJR091C 3276 nt2.72□□□□□ -1.97
RPN3P40016 RPH1YER169W 2391 nt2.72□□□□□ -1.97
RPN3P40016 SGS1YMR190C 4344 nt2.72□□□□□ -1.97
RPN3P40016 PDR11YIL013C 4236 nt2.71□□□□□ -1.98
RPN3P40016 AFI1YOR129C 2682 nt2.71□□□□□ -1.98
RPN3P40016 SCH9YHR205W 2475 nt2.71□□□□□ -1.98
RPN3P40016 SWI6YLR182W 2412 nt2.71□□□□□ -1.98
RPN3P40016 KAP123YER110C 3342 nt2.71□□□□□ -1.98
RPN3P40016 RGA2YDR379W 3030 nt2.71□□□□□ -1.98
RPN3P40016 YLR278CYLR278C 4026 nt2.7□□□□□ -1.98
RPN3P40016 MNL2YLR057W 2550 nt2.69□□□□□ -1.98
RPN3P40016 YKU80YMR106C 1890 nt2.69□□□□□ -1.98
RPN3P40016 CLN3YAL040C 1743 nt2.69□□□□□ -1.98
RPN3P40016 VTC1YER072W 390 nt2.69□□□□□ -1.98
RPN3P40016 TAF2YCR042C 4224 nt2.69□□□□□ -1.98
RPN3P40016 CRM1YGR218W 3255 nt2.68□□□□□ -1.98
RPN3P40016 RRP6YOR001W 2202 nt2.68□□□□□ -1.98
RPN3P40016 ULI1YFR026C 510 nt2.68□□□□□ -1.98
RPN3P40016 RPS27BYHR021C 249 nt2.68□□□□□ -1.98
RPN3P40016 YHR073W-AYHR073W-A 177 nt2.68□□□□□ -1.98
RPN3P40016 CRS5YOR031W 210 nt2.68□□□□□ -1.98
RPN3P40016 YOR055WYOR055W 435 nt2.68□□□□□ -1.98
RPN3P40016 YOR218CYOR218C 420 nt2.68□□□□□ -1.98
RPN3P40016 YOR394C-AYOR394C-A 168 nt2.68□□□□□ -1.98
RPN3P40016 RFX1YLR176C 2436 nt2.68□□□□□ -1.98
RPN3P40016 SWI5YDR146C 2130 nt2.68□□□□□ -1.98
RPN3P40016 SRB8YCR081W 4284 nt2.67□□□□□ -1.98
RPN3P40016 YOR381W-AYOR381W-A 168 nt2.67□□□□□ -1.98
RPN3P40016 VTC3YPL019C 2508 nt2.66□□□□□ -1.98
RPN3P40016 YIL156W-BYIL156W-B 222 nt2.66□□□□□ -1.98
RPN3P40016 CUL3YGR003W 2235 nt2.66□□□□□ -1.98
RPN3P40016 ESC1YMR219W 4977 nt2.66□□□□□ -1.98
RPN3P40016 ARP8YOR141C 2646 nt2.65□□□□□ -1.98
RPN3P40016 SAP1YER047C 2694 nt2.65□□□□□ -1.99
RPN3P40016 SRO77YBL106C 3033 nt2.64□□□□□ -1.99
RPN3P40016 YDR209CYDR209C 414 nt2.64□□□□□ -1.99
RPN3P40016 ECM12YHR021W-A 456 nt2.64□□□□□ -1.99
RPN3P40016 SLN1YIL147C 3663 nt2.64□□□□□ -1.99
RPN3P40016 ESL2YKR096W 3588 nt2.64□□□□□ -1.99
RPN3P40016 HOS4YIL112W 3252 nt2.63□□□□□ -1.99
RPN3P40016 PHO91YNR013C 2685 nt2.63□□□□□ -1.99
RPN3P40016 SPC98YNL126W 2541 nt2.63□□□□□ -1.99
RPN3P40016 SET2YJL168C 2202 nt2.63□□□□□ -1.99
RPN3P40016 YGR050CYGR050C 357 nt2.63□□□□□ -1.99
RPN3P40016 IRA2YOL081W 9240 nt2.63□□□□□ -1.99
RPN3P40016 INP51YIL002C 2841 nt2.63□□□□□ -1.99
RPN3P40016 SLY1YDR189W 2001 nt2.63□□□□□ -1.99
RPN3P40016 SMY2YBR172C 2223 nt2.62□□□□□ -1.99
RPN3P40016 MCM10YIL150C 1716 nt2.62□□□□□ -1.99
RPN3P40016 MET6YER091C 2304 nt2.62□□□□□ -1.99
RPN3P40016 YHR071C-AYHR071C-A 321 nt2.62□□□□□ -1.99
RPN3P40016 INP53YOR109W 3324 nt2.62□□□□□ -1.99
RPN3P40016 NIP100YPL174C 2607 nt2.62□□□□□ -1.99
RPN3P40016 SLM1YIL105C 2061 nt2.62□□□□□ -1.99
RPN3P40016 FLO11YIR019C 4104 nt2.61□□□□□ -1.99
RPN3P40016 LYS14YDR034C 2373 nt2.61□□□□□ -1.99
RPN3P40016 MGM1YOR211C 2646 nt2.61□□□□□ -1.99
RPN3P40016 PAU8YAL068C 363 nt2.61□□□□□ -1.99
RPN3P40016 PAU18YLL064C 363 nt2.61□□□□□ -1.99
RPN3P40016 YBL012CYBL012C 402 nt2.61□□□□□ -1.99
RPN3P40016 PAU6YNR076W 363 nt2.61□□□□□ -1.99
RPN3P40016 PAU20YOL161C 363 nt2.61□□□□□ -1.99
RPN3P40016 YOR345CYOR345C 351 nt2.61□□□□□ -1.99
RPN3P40016 SCP160YJL080C 3669 nt2.61□□□□□ -1.99
RPN3P40016 CBF2YGR140W 2871 nt2.61□□□□□ -1.99
RPN3P40016 MRD1YPR112C 2664 nt2.61□□□□□ -1.99
RPN3P40016 GIS1YDR096W 2685 nt2.6□□□□□ -1.99
RPN3P40016 SRP14YDL092W 441 nt2.6□□□□□ -1.99
RPN3P40016 YBL053WYBL053W 375 nt2.6□□□□□ -1.99
RPN3P40016 CAF120YNL278W 3183 nt2.6□□□□□ -1.99
RPN3P40016 STE11YLR362W 2154 nt2.6□□□□□ -1.99
RPN3P40016 MSB1YOR188W 3414 nt2.59□□□□□ -1.99
RPN3P40016 SPO75YLL005C 2607 nt2.59□□□□□ -1.99
RPN3P40016 YCL046WYCL046W 324 nt2.59□□□□□ -1.99
RPN3P40016 BNR1YIL159W 4128 nt2.58□□□□□ -2
RPN3P40016 CDC53YDL132W 2448 nt2.58□□□□□ -2
RPN3P40016 PMP1YCR024C-A 123 nt2.58□□□□□ -2
RPN3P40016 EMP24YGL200C 612 nt2.58□□□□□ -2
RPN3P40016 IRR1YIL026C 3453 nt2.58□□□□□ -2
RPN3P40016 NFT1YKR103W 3657 nt2.57□□□□□ -2
RPN3P40016 AMS1YGL156W 3252 nt2.57□□□□□ -2
RPN3P40016 ELG1YOR144C 2376 nt2.57□□□□□ -2
RPN3P40016 SPO21YOL091W 1830 nt2.57□□□□□ -2
RPN3P40016 SSN2YDR443C 4263 nt2.57□□□□□ -2
RPN3P40016 YCR043CYCR043C 384 nt2.57□□□□□ -2
RPN3P40016 YDR182W-AYDR182W-A 204 nt2.57□□□□□ -2
RPN3P40016 YOR161W-BYOR161W-B 261 nt2.57□□□□□ -2
RPN3P40016 RPL33BYOR234C 324 nt2.57□□□□□ -2
RPN3P40016 LCL1YPL056C 306 nt2.57□□□□□ -2
RPN3P40016 MNE1YOR350C 1992 nt2.57□□□□□ -2
RPN3P40016 MSC6YOR354C 2079 nt2.57□□□□□ -2
RPN3P40016 APL5YPL195W 2799 nt2.57□□□□□ -2
RPN3P40016 HYP2YEL034W 474 nt2.56□□□□□ -2
RPN3P40016 YLR154W-AYLR154W-A 186 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 60.2 ms