Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.838e-6■■■■□ 25
U2AF2P26368 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.858e-6■■■■□ 25
U2AF2P26368 PPARG-213ENST00000477039 1705 ntTSL 1 (best)9.74□□□□□ -0.858e-6■■■■□ 25
U2AF2P26368 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.868e-6■■■■□ 25
U2AF2P26368 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.898e-6■■■■□ 25
U2AF2P26368 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.898e-6■■■■□ 25
U2AF2P26368 ABCC10-210ENST00000505344 721 ntTSL 39.25□□□□□ -0.938e-6■■■■□ 25
U2AF2P26368 ANKRD13A-210ENST00000553251 3315 ntTSL 29.2□□□□□ -0.948e-6■■■■□ 25
U2AF2P26368 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.974e-7■■■■□ 25
U2AF2P26368 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.988e-6■■■■□ 25
U2AF2P26368 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -18e-6■■■■□ 25
U2AF2P26368 COPB2-206ENST00000510181 1037 ntTSL 28.8□□□□□ -18e-6■■■■□ 25
U2AF2P26368 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC8.61□□□□□ -1.038e-6■■■■□ 25
U2AF2P26368 ADAMTS6-202ENST00000381052 6956 ntTSL 28.46□□□□□ -1.068e-6■■■■□ 25
U2AF2P26368 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.078e-6■■■■□ 25
U2AF2P26368 TRIM66-203ENST00000481014 6505 ntTSL 28.35□□□□□ -1.078e-6■■■■□ 25
U2AF2P26368 SATB2-210ENST00000484124 579 ntTSL 48.12□□□□□ -1.118e-6■■■■□ 25
U2AF2P26368 DNAJC7-207ENST00000586335 579 ntTSL 38.11□□□□□ -1.118e-6■■■■□ 25
U2AF2P26368 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.04□□□□□ -1.128e-6■■■■□ 25
U2AF2P26368 ATP6V1E1-208ENST00000481365 692 ntTSL 47.88□□□□□ -1.158e-6■■■■□ 25
U2AF2P26368 ABHD6-204ENST00000475982 593 ntTSL 57.8□□□□□ -1.168e-6■■■■□ 25
U2AF2P26368 TNS1-212ENST00000453356 601 ntTSL 37.77□□□□□ -1.178e-6■■■■□ 25
U2AF2P26368 FAM214A-211ENST00000568637 667 ntTSL 57.68□□□□□ -1.188e-6■■■■□ 25
U2AF2P26368 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.63□□□□□ -1.198e-6■■■■□ 25
U2AF2P26368 COPB2-204ENST00000504295 3524 ntTSL 27.57□□□□□ -1.28e-6■■■■□ 25
U2AF2P26368 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.06□□□□□ -1.288e-6■■■■□ 25
U2AF2P26368 COPB2-213ENST00000515006 548 ntTSL 56.87□□□□□ -1.318e-6■■■■□ 25
U2AF2P26368 TEX10-202ENST00000429235 824 ntTSL 56.76□□□□□ -1.332e-10■■■■□ 25
U2AF2P26368 CREB3L2-202ENST00000420629 719 ntTSL 36.66□□□□□ -1.348e-6■■■■□ 25
U2AF2P26368 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.458e-6■■■■□ 25
U2AF2P26368 CEP250-214ENST00000621352 607 ntTSL 35.8□□□□□ -1.488e-6■■■■□ 25
U2AF2P26368 FAM214A-215ENST00000570204 393 ntTSL 35.55□□□□□ -1.528e-6■■■■□ 25
U2AF2P26368 CPD-209ENST00000584221 680 ntTSL 35.41□□□□□ -1.548e-6■■■■□ 25
U2AF2P26368 ATP6V1E1-204ENST00000413576 800 ntTSL 35.38□□□□□ -1.558e-6■■■■□ 25
U2AF2P26368 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.558e-6■■■■□ 25
U2AF2P26368 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.32□□□□□ -1.568e-6■■■■□ 25
U2AF2P26368 GPCPD1-205ENST00000481038 6649 ntTSL 25.28□□□□□ -1.564e-7■■■■□ 25
U2AF2P26368 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.22□□□□□ -1.578e-6■■■■□ 25
U2AF2P26368 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.583e-6■■■■□ 25
U2AF2P26368 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.638e-6■■■■□ 25
U2AF2P26368 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.633e-6■■■■□ 25
U2AF2P26368 TRIM66-205ENST00000529057 378 ntTSL 34.74□□□□□ -1.658e-6■■■■□ 25
U2AF2P26368 ALYREF-201ENST00000504015 254 ntTSL 34.51□□□□□ -1.698e-6■■■■□ 25
U2AF2P26368 SNX13-211ENST00000496855 1499 ntTSL 1 (best)4.01□□□□□ -1.778e-6■■■■□ 25
U2AF2P26368 L3HYPDH-209ENST00000543619 689 ntTSL 34□□□□□ -1.778e-6■■■■□ 25
U2AF2P26368 DNAJC7-220ENST00000590847 441 ntTSL 23.79□□□□□ -1.88e-6■■■■□ 25
U2AF2P26368 IFNAR2-209ENST00000443073 841 ntTSL 53.74□□□□□ -1.818e-6■■■■□ 25
U2AF2P26368 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.74□□□□□ -1.818e-6■■■■□ 25
U2AF2P26368 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.55□□□□□ -1.848e-6■■■■□ 25
U2AF2P26368 L3HYPDH-208ENST00000532049 612 ntTSL 23.4□□□□□ -1.878e-6■■■■□ 25
U2AF2P26368 FAM214A-214ENST00000568871 1570 ntTSL 1 (best)3.25□□□□□ -1.898e-6■■■■□ 25
U2AF2P26368 USP14-204ENST00000578786 1104 ntTSL 52.85□□□□□ -1.958e-6■■■■□ 25
U2AF2P26368 VPS8-223ENST00000485024 477 ntTSL 22.69□□□□□ -1.988e-6■■■■□ 25
U2AF2P26368 PPARG-211ENST00000438682 560 ntTSL 32.32□□□□□ -2.048e-6■■■■□ 25
U2AF2P26368 L3HYPDH-204ENST00000478430 729 ntTSL 22.28□□□□□ -2.048e-6■■■■□ 25
U2AF2P26368 ZNF292-205ENST00000466062 838 ntTSL 56.7□□□□□ -1.342e-8■■■■□ 25
U2AF2P26368 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-7■■■■□ 25
U2AF2P26368 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.134e-15■■■■□ 24.9
U2AF2P26368 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.87■□□□□ 0.134e-15■■■■□ 24.9
U2AF2P26368 SAT1-209ENST00000489394 1135 ntTSL 212.39□□□□□ -0.434e-15■■■■□ 24.9
U2AF2P26368 SAT1-206ENST00000463236 735 ntTSL 37.16□□□□□ -1.264e-15■■■■□ 24.9
U2AF2P26368 MFSD8-229ENST00000641413 854 nt6.6□□□□□ -1.352e-11■■■■□ 24.9
U2AF2P26368 DCTN4-213ENST00000521728 661 ntTSL 414.36□□□□□ -0.112e-23■■■■□ 24.9
U2AF2P26368 DCTN4-206ENST00000518909 614 ntTSL 58.26□□□□□ -1.092e-23■■■■□ 24.9
U2AF2P26368 DCTN4-214ENST00000522625 598 ntTSL 45.54□□□□□ -1.522e-23■■■■□ 24.9
U2AF2P26368 DCTN4-208ENST00000519552 662 ntTSL 43.71□□□□□ -1.822e-23■■■■□ 24.9
U2AF2P26368 MGEA5-211ENST00000494347 712 ntTSL 24.34□□□□□ -1.711e-23■■■■□ 24.9
U2AF2P26368 CDK8-205ENST00000536792 3032 ntTSL 1 (best)19.93■□□□□ 0.789e-8■■■■□ 24.9
U2AF2P26368 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.769e-8■■■■□ 24.9
U2AF2P26368 SLC18B1-203ENST00000460518 491 ntTSL 510.11□□□□□ -0.794e-7■■■■□ 24.9
U2AF2P26368 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.288e-7■■■■□ 24.9
U2AF2P26368 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.932e-7■■■■□ 24.9
U2AF2P26368 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.182e-7■■■■□ 24.9
U2AF2P26368 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.252e-7■■■■□ 24.9
U2AF2P26368 SLC7A11-202ENST00000509248 797 ntTSL 53.16□□□□□ -1.94e-7■■■■□ 24.9
U2AF2P26368 BTBD3-207ENST00000449299 849 ntTSL 224.27■■□□□ 1.481e-8■■■■□ 24.9
U2AF2P26368 BTBD3-208ENST00000450368 485 ntTSL 223.51■■□□□ 1.351e-8■■■■□ 24.9
U2AF2P26368 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.651e-8■■■■□ 24.9
U2AF2P26368 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.051e-8■■■■□ 24.9
U2AF2P26368 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.021e-8■■■■□ 24.9
U2AF2P26368 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC10.63□□□□□ -0.711e-8■■■■□ 24.9
U2AF2P26368 GPATCH8-204ENST00000586265 484 ntTSL 36.51□□□□□ -1.374e-11■■■■□ 24.9
U2AF2P26368 BTBD3-205ENST00000422390 583 ntTSL 44.35□□□□□ -1.711e-8■■■■□ 24.9
U2AF2P26368 CENPK-203ENST00000502997 760 ntTSL 31.71□□□□□ -2.143e-8■■■■□ 24.9
U2AF2P26368 RAPGEF6-214ENST00000515170 4103 ntTSL 210.93□□□□□ -0.663e-8■■■■□ 24.9
U2AF2P26368 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.97□□□□□ -1.773e-8■■■■□ 24.9
U2AF2P26368 AP1G1-203ENST00000450149 1166 ntTSL 23.92□□□□□ -1.781e-6■■■■□ 24.9
U2AF2P26368 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC14.87□□□□□ -0.034e-9■■■■□ 24.9
U2AF2P26368 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC13.73□□□□□ -0.214e-9■■■■□ 24.9
U2AF2P26368 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC11.05□□□□□ -0.644e-9■■■■□ 24.9
U2AF2P26368 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.754e-9■■■■□ 24.9
U2AF2P26368 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.54□□□□□ -0.884e-9■■■■□ 24.9
U2AF2P26368 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.341e-6■■■■□ 24.9
U2AF2P26368 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.55■□□□□ 0.722e-16■■■■□ 24.9
U2AF2P26368 TNFAIP3-209ENST00000619035 2267 ntTSL 5 BASIC14.65□□□□□ -0.062e-16■■■■□ 24.9
U2AF2P26368 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC14.33□□□□□ -0.112e-16■■■■□ 24.9
U2AF2P26368 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.172e-16■■■■□ 24.9
U2AF2P26368 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC12.72□□□□□ -0.372e-16■■■■□ 24.9
U2AF2P26368 TNFAIP3-201ENST00000237289 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.42e-16■■■■□ 24.9
U2AF2P26368 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC11.95□□□□□ -0.52e-16■■■■□ 24.9
Retrieved 100 of 36,523 protein–RNA pairs in 459 ms