RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
TNFAIP3-210ENST00000620204 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
TNFAIP3-210ENST00000620204 HRCP23327 699 aa16.37■□□□□ 0.21
TNFAIP3-210ENST00000620204 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
TNFAIP3-210ENST00000620204 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
TNFAIP3-210ENST00000620204 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
TNFAIP3-210ENST00000620204 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
TNFAIP3-210ENST00000620204 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
TNFAIP3-210ENST00000620204 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
TNFAIP3-210ENST00000620204 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
TNFAIP3-210ENST00000620204 CHIC1Q5VXU3 224 aa15.64■□□□□ 0.09
TNFAIP3-210ENST00000620204 ABCC9O60706 1549 aa15.62■□□□□ 0.09
TNFAIP3-210ENST00000620204 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
TNFAIP3-210ENST00000620204 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
TNFAIP3-210ENST00000620204 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
TNFAIP3-210ENST00000620204 TRIM26Q12899 539 aaPredicted RBP15.46■□□□□ 0.06
TNFAIP3-210ENST00000620204 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
TNFAIP3-210ENST00000620204 MYT1Q01538 1121 aa15.42■□□□□ 0.06
TNFAIP3-210ENST00000620204 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
TNFAIP3-210ENST00000620204 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
TNFAIP3-210ENST00000620204 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
TNFAIP3-210ENST00000620204 ACIN1Q9UKV3 1341 aaKnown RBP15.23■□□□□ 0.03
TNFAIP3-210ENST00000620204 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
TNFAIP3-210ENST00000620204 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
TNFAIP3-210ENST00000620204 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
TNFAIP3-210ENST00000620204 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
TNFAIP3-210ENST00000620204 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
TNFAIP3-210ENST00000620204 DCAF1Q9Y4B6 1507 aa15.09■□□□□ 0.01
TNFAIP3-210ENST00000620204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
TNFAIP3-210ENST00000620204 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
TNFAIP3-210ENST00000620204 DIEXFQ68CQ4 756 aaKnown RBP15.02■□□□□ -0
TNFAIP3-210ENST00000620204 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
TNFAIP3-210ENST00000620204 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
TNFAIP3-210ENST00000620204 NACADO15069 1562 aa14.84□□□□□ -0.03
TNFAIP3-210ENST00000620204 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
TNFAIP3-210ENST00000620204 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
TNFAIP3-210ENST00000620204 BCL11AQ9H165 835 aa14.6□□□□□ -0.07
TNFAIP3-210ENST00000620204 MIER1Q8N108 512 aa14.58□□□□□ -0.07
TNFAIP3-210ENST00000620204 ZNF316A6NFI3 1004 aaPredicted RBP14.58□□□□□ -0.08
TNFAIP3-210ENST00000620204 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
TNFAIP3-210ENST00000620204 BCANQ96GW7 911 aa14.47□□□□□ -0.09
TNFAIP3-210ENST00000620204 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
TNFAIP3-210ENST00000620204 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
TNFAIP3-210ENST00000620204 HNRNPUL2Q1KMD3 747 aaKnown RBP14.43□□□□□ -0.1
TNFAIP3-210ENST00000620204 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
TNFAIP3-210ENST00000620204 WIZO95785 1651 aa14.35□□□□□ -0.11
TNFAIP3-210ENST00000620204 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-210ENST00000620204 UNC13AQ9UPW8 1703 aa14.34□□□□□ -0.11
TNFAIP3-210ENST00000620204 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
TNFAIP3-210ENST00000620204 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-210ENST00000620204 UBTFP17480 764 aaKnown RBP14.27□□□□□ -0.13
TNFAIP3-210ENST00000620204 RANGAP1P46060 587 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-210ENST00000620204 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
TNFAIP3-210ENST00000620204 ERICH6Q7L0X2 663 aa14.23□□□□□ -0.13
TNFAIP3-210ENST00000620204 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
TNFAIP3-210ENST00000620204 FKBP8Q14318 412 aa14.17□□□□□ -0.14
TNFAIP3-210ENST00000620204 NEFLP07196 543 aa14.15□□□□□ -0.14
TNFAIP3-210ENST00000620204 ITGAEP38570 1179 aa14.14□□□□□ -0.15
TNFAIP3-210ENST00000620204 APLP2Q06481 763 aa14.13□□□□□ -0.15
TNFAIP3-210ENST00000620204 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
TNFAIP3-210ENST00000620204 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
TNFAIP3-210ENST00000620204 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
TNFAIP3-210ENST00000620204 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
TNFAIP3-210ENST00000620204 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
TNFAIP3-210ENST00000620204 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
TNFAIP3-210ENST00000620204 PRKCSHP14314 528 aaPredicted RBP14.02□□□□□ -0.16
TNFAIP3-210ENST00000620204 KCNH8Q96L42 1107 aa14.02□□□□□ -0.17
TNFAIP3-210ENST00000620204 ABCC8Q09428 1581 aa13.99□□□□□ -0.17
TNFAIP3-210ENST00000620204 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
TNFAIP3-210ENST00000620204 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
TNFAIP3-210ENST00000620204 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
TNFAIP3-210ENST00000620204 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
TNFAIP3-210ENST00000620204 CEP162Q5TB80 1403 aa13.9□□□□□ -0.18
TNFAIP3-210ENST00000620204 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-210ENST00000620204 NBR1Q14596 966 aa13.87□□□□□ -0.19
TNFAIP3-210ENST00000620204 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
TNFAIP3-210ENST00000620204 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
TNFAIP3-210ENST00000620204 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
TNFAIP3-210ENST00000620204 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
TNFAIP3-210ENST00000620204 MSH5O43196 834 aa13.81□□□□□ -0.2
TNFAIP3-210ENST00000620204 DEKP35659 375 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-210ENST00000620204 SOGA1O94964 1423 aa13.79□□□□□ -0.2
TNFAIP3-210ENST00000620204 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
TNFAIP3-210ENST00000620204 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
TNFAIP3-210ENST00000620204 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
TNFAIP3-210ENST00000620204 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
TNFAIP3-210ENST00000620204 CCDC136Q96JN2 1154 aa13.73□□□□□ -0.21
TNFAIP3-210ENST00000620204 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
TNFAIP3-210ENST00000620204 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
TNFAIP3-210ENST00000620204 ANP32CO43423 234 aa13.7□□□□□ -0.22
TNFAIP3-210ENST00000620204 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
TNFAIP3-210ENST00000620204 RTL5Q5HYW3 569 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP3-210ENST00000620204 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
TNFAIP3-210ENST00000620204 NESP48681 1621 aa13.65□□□□□ -0.22
TNFAIP3-210ENST00000620204 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP3-210ENST00000620204 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
TNFAIP3-210ENST00000620204 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-210ENST00000620204 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-210ENST00000620204 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
TNFAIP3-210ENST00000620204 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms