RNA–Protein interactions for RNA: ENST00000370586.6

R3HCC1L-204, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

TSL 3 BASIC

Gene R3HCC1L, Length 941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-204ENST00000370586 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
R3HCC1L-204ENST00000370586 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
R3HCC1L-204ENST00000370586 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
R3HCC1L-204ENST00000370586 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
R3HCC1L-204ENST00000370586 FOXD1Q16676 465 aa21.26■□□□□ 0.99
R3HCC1L-204ENST00000370586 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
R3HCC1L-204ENST00000370586 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
R3HCC1L-204ENST00000370586 ADRA2BP18089 450 aa20.3■□□□□ 0.84
R3HCC1L-204ENST00000370586 PIAS4Q8N2W9 510 aaPredicted RBP19.93■□□□□ 0.78
R3HCC1L-204ENST00000370586 MSH5O43196 834 aa19.56■□□□□ 0.72
R3HCC1L-204ENST00000370586 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
R3HCC1L-204ENST00000370586 MAPK8IP2Q13387 824 aaPredicted RBP18.49■□□□□ 0.55
R3HCC1L-204ENST00000370586 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
R3HCC1L-204ENST00000370586 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
R3HCC1L-204ENST00000370586 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
R3HCC1L-204ENST00000370586 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
R3HCC1L-204ENST00000370586 KCNA4P22459 653 aa17.97■□□□□ 0.47
R3HCC1L-204ENST00000370586 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
R3HCC1L-204ENST00000370586 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
R3HCC1L-204ENST00000370586 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
R3HCC1L-204ENST00000370586 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
R3HCC1L-204ENST00000370586 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
R3HCC1L-204ENST00000370586 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
R3HCC1L-204ENST00000370586 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
R3HCC1L-204ENST00000370586 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
R3HCC1L-204ENST00000370586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■□□□ 11.9
R3HCC1L-204ENST00000370586 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
R3HCC1L-204ENST00000370586 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
R3HCC1L-204ENST00000370586 ZBTB22O15209 634 aa16.59■□□□□ 0.25
R3HCC1L-204ENST00000370586 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
R3HCC1L-204ENST00000370586 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
R3HCC1L-204ENST00000370586 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
R3HCC1L-204ENST00000370586 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
R3HCC1L-204ENST00000370586 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
R3HCC1L-204ENST00000370586 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
R3HCC1L-204ENST00000370586 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
R3HCC1L-204ENST00000370586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
R3HCC1L-204ENST00000370586 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
R3HCC1L-204ENST00000370586 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
R3HCC1L-204ENST00000370586 CAPN15O75808 1086 aa16.11■□□□□ 0.17
R3HCC1L-204ENST00000370586 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
R3HCC1L-204ENST00000370586 APLP2Q06481 763 aa16.07■□□□□ 0.16
R3HCC1L-204ENST00000370586 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
R3HCC1L-204ENST00000370586 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
R3HCC1L-204ENST00000370586 DSG3P32926 999 aa15.95■□□□□ 0.14
R3HCC1L-204ENST00000370586 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
R3HCC1L-204ENST00000370586 ABCB7O75027 752 aa15.84■□□□□ 0.13
R3HCC1L-204ENST00000370586 POLA2Q14181 598 aa15.74■□□□□ 0.11
R3HCC1L-204ENST00000370586 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
R3HCC1L-204ENST00000370586 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
R3HCC1L-204ENST00000370586 FBLN2P98095 1184 aa15.25■□□□□ 0.03
R3HCC1L-204ENST00000370586 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
R3HCC1L-204ENST00000370586 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
R3HCC1L-204ENST00000370586 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
R3HCC1L-204ENST00000370586 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
R3HCC1L-204ENST00000370586 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
R3HCC1L-204ENST00000370586 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
R3HCC1L-204ENST00000370586 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
R3HCC1L-204ENST00000370586 SSUH2Q9Y2M2 353 aa14.9□□□□□ -0.02
R3HCC1L-204ENST00000370586 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
R3HCC1L-204ENST00000370586 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
R3HCC1L-204ENST00000370586 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
R3HCC1L-204ENST00000370586 FKBP8Q14318 412 aa14.68□□□□□ -0.06
R3HCC1L-204ENST00000370586 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
R3HCC1L-204ENST00000370586 PROM2Q8N271 834 aa14.63□□□□□ -0.07
R3HCC1L-204ENST00000370586 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
R3HCC1L-204ENST00000370586 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
R3HCC1L-204ENST00000370586 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
R3HCC1L-204ENST00000370586 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
R3HCC1L-204ENST00000370586 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
R3HCC1L-204ENST00000370586 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
R3HCC1L-204ENST00000370586 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
R3HCC1L-204ENST00000370586 POTEHQ6S545 545 aa14.36□□□□□ -0.11
R3HCC1L-204ENST00000370586 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
R3HCC1L-204ENST00000370586 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
R3HCC1L-204ENST00000370586 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
R3HCC1L-204ENST00000370586 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
R3HCC1L-204ENST00000370586 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
R3HCC1L-204ENST00000370586 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
R3HCC1L-204ENST00000370586 MIER1Q8N108 512 aa14.07□□□□□ -0.16
R3HCC1L-204ENST00000370586 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
R3HCC1L-204ENST00000370586 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
R3HCC1L-204ENST00000370586 HAX1O00165 279 aa13.94□□□□□ -0.18
R3HCC1L-204ENST00000370586 EVX2Q03828 476 aa13.94□□□□□ -0.18
R3HCC1L-204ENST00000370586 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
R3HCC1L-204ENST00000370586 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
R3HCC1L-204ENST00000370586 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
R3HCC1L-204ENST00000370586 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
R3HCC1L-204ENST00000370586 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
R3HCC1L-204ENST00000370586 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
R3HCC1L-204ENST00000370586 NUBP1P53384 320 aa13.8□□□□□ -0.2
R3HCC1L-204ENST00000370586 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
R3HCC1L-204ENST00000370586 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
R3HCC1L-204ENST00000370586 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
R3HCC1L-204ENST00000370586 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
R3HCC1L-204ENST00000370586 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
R3HCC1L-204ENST00000370586 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
R3HCC1L-204ENST00000370586 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
R3HCC1L-204ENST00000370586 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
R3HCC1L-204ENST00000370586 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms