RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 NISCHQ9Y2I1 1504 aa8.27□□□□□ -1.08
GPCPD1-205ENST00000481038 MYT1Q01538 1121 aa8.05□□□□□ -1.12
GPCPD1-205ENST00000481038 PELP1Q8IZL8 1130 aaKnown RBP7.94□□□□□ -1.14
GPCPD1-205ENST00000481038 TTBK1Q5TCY1 1321 aaPredicted RBP7.55□□□□□ -1.2
GPCPD1-205ENST00000481038 DCAF8L2P0C7V8 631 aa7.45□□□□□ -1.22
GPCPD1-205ENST00000481038 ERICH6Q7L0X2 663 aa7.45□□□□□ -1.22
GPCPD1-205ENST00000481038 SLC24A1O60721 1099 aa7.34□□□□□ -1.23
GPCPD1-205ENST00000481038 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
GPCPD1-205ENST00000481038 CCDC180Q9P1Z9 1646 aa7.22□□□□□ -1.25
GPCPD1-205ENST00000481038 CENPBP07199 599 aaPredicted RBP7.11□□□□□ -1.27
GPCPD1-205ENST00000481038 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
GPCPD1-205ENST00000481038 ABCC9O60706 1549 aa6.98□□□□□ -1.29
GPCPD1-205ENST00000481038 EHMT2Q96KQ7 1210 aa6.98□□□□□ -1.29
GPCPD1-205ENST00000481038 YTHDC1Q96MU7 727 aaKnown RBP6.96□□□□□ -1.3
GPCPD1-205ENST00000481038 SHROOM4Q9ULL8 1493 aa6.94□□□□□ -1.3
GPCPD1-205ENST00000481038 ZCCHC6Q5VYS8 1495 aaKnown RBP6.89□□□□□ -1.31
GPCPD1-205ENST00000481038 SUPT5HO00267 1087 aaKnown RBP6.89□□□□□ -1.31
GPCPD1-205ENST00000481038 NACADO15069 1562 aa6.88□□□□□ -1.31
GPCPD1-205ENST00000481038 RB1CC1Q8TDY2 1594 aa6.88□□□□□ -1.31
GPCPD1-205ENST00000481038 DCAF1Q9Y4B6 1507 aa6.86□□□□□ -1.31
GPCPD1-205ENST00000481038 GLIPR1L2Q4G1C9 344 aa6.85□□□□□ -1.31
GPCPD1-205ENST00000481038 EIF5BO60841 1220 aaKnown RBP6.82□□□□□ -1.32
GPCPD1-205ENST00000481038 MYO15BQ96JP2 1530 aa6.81□□□□□ -1.32
GPCPD1-205ENST00000481038 DAXXQ9UER7 740 aaPredicted RBP6.81□□□□□ -1.32
GPCPD1-205ENST00000481038 FAM9AQ8IZU1 332 aaPredicted RBP6.8□□□□□ -1.32
GPCPD1-205ENST00000481038 ZEB1P37275 1124 aaPredicted RBP6.8□□□□□ -1.32
GPCPD1-205ENST00000481038 BCL11AQ9H165 835 aa6.79□□□□□ -1.32
GPCPD1-205ENST00000481038 HRCP23327 699 aa6.75□□□□□ -1.33
GPCPD1-205ENST00000481038 AMER1Q5JTC6 1135 aaPredicted RBP6.74□□□□□ -1.33
GPCPD1-205ENST00000481038 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
GPCPD1-205ENST00000481038 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
GPCPD1-205ENST00000481038 PRKCSHP14314 528 aaPredicted RBP6.71□□□□□ -1.33
GPCPD1-205ENST00000481038 NEFLP07196 543 aa6.71□□□□□ -1.34
GPCPD1-205ENST00000481038 CHIC1Q5VXU3 224 aa6.67□□□□□ -1.34
GPCPD1-205ENST00000481038 SCRIBQ14160 1630 aa6.66□□□□□ -1.34
GPCPD1-205ENST00000481038 PABPN1Q86U42 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
GPCPD1-205ENST00000481038 GTF3C3Q9Y5Q9 886 aa6.63□□□□□ -1.35
GPCPD1-205ENST00000481038 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
GPCPD1-205ENST00000481038 TRIM41Q8WV44 630 aa6.59□□□□□ -1.35
GPCPD1-205ENST00000481038 APLP2Q06481 763 aa6.58□□□□□ -1.36
GPCPD1-205ENST00000481038 POLR3GLQ9BT43 218 aa6.58□□□□□ -1.36
GPCPD1-205ENST00000481038 CLSPNQ9HAW4 1339 aa6.57□□□□□ -1.36
GPCPD1-205ENST00000481038 HOMEZQ8IX15 550 aa6.56□□□□□ -1.36
GPCPD1-205ENST00000481038 HMGB1P09429 215 aaKnown RBP6.55□□□□□ -1.36
GPCPD1-205ENST00000481038 ANP32EQ9BTT0 268 aa6.55□□□□□ -1.36
GPCPD1-205ENST00000481038 BAZ1AQ9NRL2 1556 aaPredicted RBP6.54□□□□□ -1.36
GPCPD1-205ENST00000481038 PODXL2Q9NZ53 605 aa6.53□□□□□ -1.36
GPCPD1-205ENST00000481038 NCBP3Q53F19 620 aaKnown RBP6.53□□□□□ -1.36
GPCPD1-205ENST00000481038 ARXQ96QS3 562 aa6.53□□□□□ -1.36
GPCPD1-205ENST00000481038 ACIN1Q9UKV3 1341 aaKnown RBP6.52□□□□□ -1.37
GPCPD1-205ENST00000481038 PPARGC1BQ86YN6 1023 aaKnown RBP6.52□□□□□ -1.37
GPCPD1-205ENST00000481038 ZNF316A6NFI3 1004 aaPredicted RBP6.49□□□□□ -1.37
GPCPD1-205ENST00000481038 SCAF1Q9H7N4 1312 aaKnown RBP6.49□□□□□ -1.37
GPCPD1-205ENST00000481038 SMARCA2P51531 1590 aa6.48□□□□□ -1.37
GPCPD1-205ENST00000481038 BCANQ96GW7 911 aa6.47□□□□□ -1.37
GPCPD1-205ENST00000481038 BAZ1BQ9UIG0 1483 aaKnown RBP6.46□□□□□ -1.38
GPCPD1-205ENST00000481038 UBTFP17480 764 aaKnown RBP6.42□□□□□ -1.38
GPCPD1-205ENST00000481038 RSF1Q96T23 1441 aaPredicted RBP6.41□□□□□ -1.38
GPCPD1-205ENST00000481038 PKNOX2Q96KN3 472 aa6.4□□□□□ -1.38
GPCPD1-205ENST00000481038 TNNT2P45379 298 aaPredicted RBP6.38□□□□□ -1.39
GPCPD1-205ENST00000481038 CDK11BP21127 795 aaKnown RBP6.38□□□□□ -1.39
GPCPD1-205ENST00000481038 CDK11AQ9UQ88 783 aaPredicted RBP6.38□□□□□ -1.39
GPCPD1-205ENST00000481038 ZNF326Q5BKZ1 582 aaKnown RBP6.37□□□□□ -1.39
GPCPD1-205ENST00000481038 DIEXFQ68CQ4 756 aaKnown RBP6.36□□□□□ -1.39
GPCPD1-205ENST00000481038 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
GPCPD1-205ENST00000481038 HAP1P54257 671 aaPredicted RBP6.35□□□□□ -1.39
GPCPD1-205ENST00000481038 EEA1Q15075 1411 aa6.35□□□□□ -1.39
GPCPD1-205ENST00000481038 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.4
GPCPD1-205ENST00000481038 PDS5BQ9NTI5 1447 aa6.33□□□□□ -1.4
GPCPD1-205ENST00000481038 RTN4Q9NQC3 1192 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-205ENST00000481038 SMARCA4P51532 1647 aa6.32□□□□□ -1.4
GPCPD1-205ENST00000481038 TOP2AP11388 1531 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-205ENST00000481038 C14orf37Q86TY3 774 aa6.32□□□□□ -1.4
GPCPD1-205ENST00000481038 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.32□□□□□ -1.4
GPCPD1-205ENST00000481038 TRIM26Q12899 539 aaPredicted RBP6.32□□□□□ -1.4
GPCPD1-205ENST00000481038 NBR1Q14596 966 aa6.31□□□□□ -1.4
GPCPD1-205ENST00000481038 ANP32AP39687 249 aaKnown RBP6.3□□□□□ -1.4
GPCPD1-205ENST00000481038 ERCC6Q03468 1493 aa6.3□□□□□ -1.4
GPCPD1-205ENST00000481038 ATAD2BQ9ULI0 1458 aa6.3□□□□□ -1.4
GPCPD1-205ENST00000481038 ERICH6BQ5W0A0 696 aa6.3□□□□□ -1.4
GPCPD1-205ENST00000481038 CECR2Q9BXF3 1484 aa6.29□□□□□ -1.4
GPCPD1-205ENST00000481038 ABCC8Q09428 1581 aa6.29□□□□□ -1.4
GPCPD1-205ENST00000481038 NCAPD3P42695 1498 aa6.29□□□□□ -1.4
GPCPD1-205ENST00000481038 CCDC136Q96JN2 1154 aa6.29□□□□□ -1.4
GPCPD1-205ENST00000481038 NEUROD1Q13562 356 aa6.28□□□□□ -1.4
GPCPD1-205ENST00000481038 CSRNP3Q8WYN3 585 aa6.28□□□□□ -1.4
GPCPD1-205ENST00000481038 MROH2BQ7Z745 1585 aa6.28□□□□□ -1.4
GPCPD1-205ENST00000481038 ATP1B4Q9UN42 357 aaPredicted RBP6.28□□□□□ -1.4
GPCPD1-205ENST00000481038 PDE4CQ08493 712 aa6.27□□□□□ -1.41
GPCPD1-205ENST00000481038 VSIG10Q8N0Z9 540 aa6.27□□□□□ -1.41
GPCPD1-205ENST00000481038 EIF4G1Q04637 1599 aaKnown RBP6.26□□□□□ -1.41
GPCPD1-205ENST00000481038 TRIM44Q96DX7 344 aaPredicted RBP6.26□□□□□ -1.41
GPCPD1-205ENST00000481038 WRNQ14191 1432 aaPredicted RBP eCLIP6.26□□□□□ -1.41
GPCPD1-205ENST00000481038 HMGXB3Q12766 1538 aa6.26□□□□□ -1.41
GPCPD1-205ENST00000481038 DEKP35659 375 aaKnown RBP6.25□□□□□ -1.41
GPCPD1-205ENST00000481038 CADPSQ9ULU8 1353 aa6.25□□□□□ -1.41
GPCPD1-205ENST00000481038 TULP1O00294 542 aaPredicted RBP6.25□□□□□ -1.41
GPCPD1-205ENST00000481038 NAP1L5Q96NT1 182 aaPredicted RBP6.24□□□□□ -1.41
GPCPD1-205ENST00000481038 KIF27Q86VH2 1401 aa6.24□□□□□ -1.41
GPCPD1-205ENST00000481038 FBXO3Q9UK99 471 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms