Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
MMP11P24347 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 AC092368.3-202ENST00000574180 1591 ntBASIC19.15■□□□□ 0.66
MMP11P24347 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.14■□□□□ 0.66
MMP11P24347 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP11P24347 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MMP11P24347 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MMP11P24347 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.14■□□□□ 0.65
MMP11P24347 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.14■□□□□ 0.65
MMP11P24347 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
MMP11P24347 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MMP11P24347 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP11P24347 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP11P24347 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP11P24347 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP11P24347 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP11P24347 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP11P24347 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP11P24347 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP11P24347 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
MMP11P24347 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP11P24347 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP11P24347 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP11P24347 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP11P24347 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
MMP11P24347 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 AC098590.1-201ENST00000468126 897 ntBASIC19.12■□□□□ 0.65
MMP11P24347 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 C2orf69P4-201ENST00000565394 541 ntBASIC19.12■□□□□ 0.65
MMP11P24347 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.12■□□□□ 0.65
MMP11P24347 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
MMP11P24347 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP11P24347 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP11P24347 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MMP11P24347 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP11P24347 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MMP11P24347 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 AC073314.1-201ENST00000568729 2216 ntBASIC19.11■□□□□ 0.65
MMP11P24347 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP11P24347 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.11■□□□□ 0.65
MMP11P24347 GCSHP5-201ENST00000443090 522 ntBASIC19.11■□□□□ 0.65
MMP11P24347 UNC93B4-201ENST00000505679 747 ntBASIC19.11■□□□□ 0.65
MMP11P24347 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 AC008403.3-201ENST00000598924 454 ntBASIC19.11■□□□□ 0.65
MMP11P24347 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP11P24347 AC073648.6-201ENST00000641589 218 ntBASIC19.11■□□□□ 0.65
MMP11P24347 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP11P24347 AP005212.1-201ENST00000581547 1997 ntBASIC19.11■□□□□ 0.65
MMP11P24347 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP11P24347 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP11P24347 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP11P24347 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms