Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AL355385.1-201ENST00000606123 409 ntBASIC16.51■□□□□ 0.23
NF1P21359 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.5■□□□□ 0.23
NF1P21359 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.5■□□□□ 0.23
NF1P21359 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.5■□□□□ 0.23
NF1P21359 AC026271.3-201ENST00000571884 352 ntBASIC16.5■□□□□ 0.23
NF1P21359 AC092053.2-201ENST00000640557 1818 ntBASIC16.5■□□□□ 0.23
NF1P21359 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.5■□□□□ 0.23
NF1P21359 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NF1P21359 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.5■□□□□ 0.23
NF1P21359 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NF1P21359 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
NF1P21359 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.5■□□□□ 0.23
NF1P21359 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NF1P21359 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.49■□□□□ 0.23
NF1P21359 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.49■□□□□ 0.23
NF1P21359 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.49■□□□□ 0.23
NF1P21359 AL359075.1-203ENST00000462729 1002 ntBASIC16.49■□□□□ 0.23
NF1P21359 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.49■□□□□ 0.23
NF1P21359 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.49■□□□□ 0.23
NF1P21359 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NF1P21359 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.49■□□□□ 0.23
NF1P21359 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.49■□□□□ 0.23
NF1P21359 AC012313.10-201ENST00000623509 926 ntBASIC16.49■□□□□ 0.23
NF1P21359 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NF1P21359 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.49■□□□□ 0.23
NF1P21359 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.49■□□□□ 0.23
NF1P21359 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
NF1P21359 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.49■□□□□ 0.23
NF1P21359 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.49■□□□□ 0.23
NF1P21359 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 NBPF21P-201ENST00000425093 1451 ntBASIC16.49■□□□□ 0.23
NF1P21359 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NF1P21359 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NF1P21359 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.49■□□□□ 0.23
NF1P21359 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NF1P21359 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.48■□□□□ 0.23
NF1P21359 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 MESTP1-201ENST00000404287 994 ntBASIC16.48■□□□□ 0.23
NF1P21359 AC091799.1-201ENST00000422823 811 ntBASIC16.48■□□□□ 0.23
NF1P21359 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
NF1P21359 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.48■□□□□ 0.23
NF1P21359 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.48■□□□□ 0.23
NF1P21359 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NF1P21359 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NF1P21359 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.47■□□□□ 0.23
NF1P21359 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NF1P21359 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NF1P21359 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.47■□□□□ 0.23
NF1P21359 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.47■□□□□ 0.23
NF1P21359 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.47■□□□□ 0.23
NF1P21359 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.47■□□□□ 0.23
NF1P21359 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NF1P21359 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.47■□□□□ 0.23
NF1P21359 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NF1P21359 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.46■□□□□ 0.23
NF1P21359 CDV3P1-201ENST00000471403 739 ntBASIC16.46■□□□□ 0.23
NF1P21359 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms