Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 EDA-201ENST00000338901 1233 ntBASIC20.21■□□□□ 0.83
KRT4P19013 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.21■□□□□ 0.83
KRT4P19013 AC096631.2-201ENST00000436136 790 ntBASIC20.21■□□□□ 0.83
KRT4P19013 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.21■□□□□ 0.83
KRT4P19013 AC106739.1-201ENST00000617035 715 ntBASIC20.21■□□□□ 0.83
KRT4P19013 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KRT4P19013 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
KRT4P19013 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT4P19013 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT4P19013 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KRT4P19013 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT4P19013 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 AL354811.1-201ENST00000610286 706 ntBASIC20.2■□□□□ 0.82
KRT4P19013 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT4P19013 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT4P19013 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KRT4P19013 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT4P19013 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT4P19013 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KRT4P19013 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT4P19013 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT4P19013 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KRT4P19013 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
KRT4P19013 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 MIR939-201ENST00000401314 82 ntBASIC20.19■□□□□ 0.82
KRT4P19013 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT4P19013 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT4P19013 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT4P19013 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT4P19013 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT4P19013 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT4P19013 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT4P19013 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KRT4P19013 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT4P19013 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
KRT4P19013 KRT8P36-201ENST00000489121 1440 ntBASIC20.19■□□□□ 0.82
KRT4P19013 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 AC093484.2-201ENST00000580996 2166 ntBASIC20.18■□□□□ 0.82
KRT4P19013 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KRT4P19013 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT4P19013 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT4P19013 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 AC091305.1-201ENST00000479476 895 ntBASIC20.18■□□□□ 0.82
KRT4P19013 AF213884.3-201ENST00000563833 479 ntBASIC20.18■□□□□ 0.82
KRT4P19013 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT4P19013 AL355001.2-201ENST00000620617 1191 ntBASIC20.18■□□□□ 0.82
KRT4P19013 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT4P19013 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT4P19013 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT4P19013 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT4P19013 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT4P19013 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KRT4P19013 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT4P19013 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.17■□□□□ 0.82
KRT4P19013 TNXA-203ENST00000507684 2038 ntBASIC20.17■□□□□ 0.82
KRT4P19013 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT4P19013 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT4P19013 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
KRT4P19013 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT4P19013 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KRT4P19013 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT4P19013 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT4P19013 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT4P19013 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms