Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.64■□□□□ 0.25
ACANP16112 PGM5P4-201ENST00000421970 445 ntBASIC16.64■□□□□ 0.25
ACANP16112 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ACANP16112 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.64■□□□□ 0.25
ACANP16112 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.64■□□□□ 0.25
ACANP16112 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACANP16112 AC139887.4-201ENST00000607877 719 ntBASIC16.64■□□□□ 0.25
ACANP16112 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.63■□□□□ 0.25
ACANP16112 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ACANP16112 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ACANP16112 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 INGX-201ENST00000359239 846 ntBASIC16.63■□□□□ 0.25
ACANP16112 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 CR392000.1-201ENST00000624770 1228 ntBASIC16.63■□□□□ 0.25
ACANP16112 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.63■□□□□ 0.25
ACANP16112 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ACANP16112 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ACANP16112 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.63■□□□□ 0.25
ACANP16112 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACANP16112 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.63■□□□□ 0.25
ACANP16112 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
ACANP16112 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 TSPY14P-201ENST00000303979 915 ntBASIC16.62■□□□□ 0.25
ACANP16112 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.62■□□□□ 0.25
ACANP16112 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.62■□□□□ 0.25
ACANP16112 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 MESTP1-201ENST00000404287 994 ntBASIC16.62■□□□□ 0.25
ACANP16112 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ACANP16112 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.62■□□□□ 0.25
ACANP16112 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ACANP16112 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.62■□□□□ 0.25
ACANP16112 AP005242.2-201ENST00000580065 1175 ntBASIC16.62■□□□□ 0.25
ACANP16112 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.62■□□□□ 0.25
ACANP16112 AL031985.4-201ENST00000642138 673 ntBASIC16.62■□□□□ 0.25
ACANP16112 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.62■□□□□ 0.25
ACANP16112 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.62■□□□□ 0.25
ACANP16112 AC011558.1-201ENST00000623459 338 ntBASIC16.62■□□□□ 0.25
ACANP16112 AL121956.5-201ENST00000625261 221 ntBASIC16.62■□□□□ 0.25
ACANP16112 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.62■□□□□ 0.25
ACANP16112 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ACANP16112 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ACANP16112 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.62■□□□□ 0.25
ACANP16112 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.62■□□□□ 0.25
ACANP16112 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ACANP16112 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACANP16112 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.61■□□□□ 0.25
ACANP16112 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.61■□□□□ 0.25
ACANP16112 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.61■□□□□ 0.25
ACANP16112 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.61■□□□□ 0.25
ACANP16112 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ACANP16112 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.61■□□□□ 0.25
ACANP16112 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.61■□□□□ 0.25
ACANP16112 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ACANP16112 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.61■□□□□ 0.25
ACANP16112 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.61■□□□□ 0.25
ACANP16112 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.61■□□□□ 0.25
ACANP16112 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.61■□□□□ 0.25
ACANP16112 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.61■□□□□ 0.25
ACANP16112 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.61■□□□□ 0.25
ACANP16112 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACANP16112 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACANP16112 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.6■□□□□ 0.25
ACANP16112 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACANP16112 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.6■□□□□ 0.25
ACANP16112 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ACANP16112 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ACANP16112 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACANP16112 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms