Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.24■□□□□ 0.35
ACAA1P09110 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.24■□□□□ 0.35
ACAA1P09110 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.24■□□□□ 0.35
ACAA1P09110 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.24■□□□□ 0.35
ACAA1P09110 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 AC100791.3-201ENST00000617619 330 ntBASIC17.24■□□□□ 0.35
ACAA1P09110 AC231657.2-201ENST00000624556 255 ntBASIC17.24■□□□□ 0.35
ACAA1P09110 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.24■□□□□ 0.35
ACAA1P09110 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
ACAA1P09110 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
ACAA1P09110 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ACAA1P09110 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
ACAA1P09110 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACAA1P09110 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.24■□□□□ 0.35
ACAA1P09110 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
ACAA1P09110 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.23■□□□□ 0.35
ACAA1P09110 LINC01006-201ENST00000333319 2292 ntBASIC17.23■□□□□ 0.35
ACAA1P09110 AC092720.2-201ENST00000602388 1665 ntBASIC17.23■□□□□ 0.35
ACAA1P09110 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACAA1P09110 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.23■□□□□ 0.35
ACAA1P09110 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACAA1P09110 AC080038.1-201ENST00000611274 1154 ntBASIC17.23■□□□□ 0.35
ACAA1P09110 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.23■□□□□ 0.35
ACAA1P09110 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACAA1P09110 AL162377.1-201ENST00000618844 1793 ntBASIC17.23■□□□□ 0.35
ACAA1P09110 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
ACAA1P09110 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ACAA1P09110 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.22■□□□□ 0.35
ACAA1P09110 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ACAA1P09110 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.22■□□□□ 0.35
ACAA1P09110 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 CNN2P6-201ENST00000439038 900 ntBASIC17.22■□□□□ 0.35
ACAA1P09110 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.22■□□□□ 0.35
ACAA1P09110 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.22■□□□□ 0.35
ACAA1P09110 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.22■□□□□ 0.35
ACAA1P09110 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ACAA1P09110 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACAA1P09110 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ACAA1P09110 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ACAA1P09110 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
ACAA1P09110 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ACAA1P09110 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.21■□□□□ 0.35
ACAA1P09110 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.21■□□□□ 0.35
ACAA1P09110 AC007322.1-201ENST00000426983 750 ntBASIC17.21■□□□□ 0.35
ACAA1P09110 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.21■□□□□ 0.35
ACAA1P09110 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.21■□□□□ 0.35
ACAA1P09110 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.21■□□□□ 0.35
ACAA1P09110 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ACAA1P09110 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ACAA1P09110 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACAA1P09110 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.21■□□□□ 0.35
ACAA1P09110 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
ACAA1P09110 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.21■□□□□ 0.34
ACAA1P09110 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ACAA1P09110 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACAA1P09110 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.2■□□□□ 0.34
ACAA1P09110 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACAA1P09110 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.2■□□□□ 0.34
ACAA1P09110 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACAA1P09110 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.2■□□□□ 0.34
ACAA1P09110 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACAA1P09110 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ACAA1P09110 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
ACAA1P09110 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACAA1P09110 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ACAA1P09110 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACAA1P09110 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ACAA1P09110 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACAA1P09110 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms