Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YGR045CYGR045C 363 nt1.14□□□□□ -2.23
RAD3P06839 FYV7YLR068W 456 nt1.14□□□□□ -2.23
RAD3P06839 TIM18YOR297C 579 nt1.14□□□□□ -2.23
RAD3P06839 YBR032WYBR032W 303 nt1.14□□□□□ -2.23
RAD3P06839 ZRG17YNR039C 1818 nt1.14□□□□□ -2.23
RAD3P06839 MSS11YMR164C 2277 nt1.14□□□□□ -2.23
RAD3P06839 YCS4YLR272C 3531 nt1.13□□□□□ -2.23
RAD3P06839 YDR003W-AYDR003W-A 123 nt1.13□□□□□ -2.23
RAD3P06839 YDR008CYDR008C 351 nt1.13□□□□□ -2.23
RAD3P06839 NFU1YKL040C 771 nt1.13□□□□□ -2.23
RAD3P06839 PBI2YNL015W 228 nt1.13□□□□□ -2.23
RAD3P06839 CDC33YOL139C 642 nt1.13□□□□□ -2.23
RAD3P06839 HDA3YPR179C 1968 nt1.13□□□□□ -2.23
RAD3P06839 ROM2YLR371W 4071 nt1.13□□□□□ -2.23
RAD3P06839 RAD50YNL250W 3939 nt1.12□□□□□ -2.23
RAD3P06839 HMLALPHA2YCL067C 633 nt1.12□□□□□ -2.23
RAD3P06839 MATALPHA2YCR039C 633 nt1.12□□□□□ -2.23
RAD3P06839 YGL217CYGL217C 342 nt1.12□□□□□ -2.23
RAD3P06839 BIG1YHR101C 1008 nt1.12□□□□□ -2.23
RAD3P06839 AIM29YKR074W 468 nt1.12□□□□□ -2.23
RAD3P06839 TSC3YBR058C-A 243 nt1.12□□□□□ -2.23
RAD3P06839 YLL054CYLL054C 2532 nt1.12□□□□□ -2.23
RAD3P06839 SEC3YER008C 4011 nt1.11□□□□□ -2.23
RAD3P06839 YCR001WYCR001W 315 nt1.11□□□□□ -2.23
RAD3P06839 PAM16YJL104W 450 nt1.11□□□□□ -2.23
RAD3P06839 RPS30BYOR182C 192 nt1.11□□□□□ -2.23
RAD3P06839 SLX4YLR135W 2247 nt1.11□□□□□ -2.23
RAD3P06839 NUP188YML103C 4968 nt1.1□□□□□ -2.23
RAD3P06839 YLL020CYLL020C 306 nt1.1□□□□□ -2.23
RAD3P06839 RPL32YBL092W 393 nt1.1□□□□□ -2.23
RAD3P06839 SGO1YOR073W 1773 nt1.1□□□□□ -2.23
RAD3P06839 YML108WYML108W 318 nt1.09□□□□□ -2.23
RAD3P06839 CLU1YMR012W 3834 nt1.09□□□□□ -2.23
RAD3P06839 YOP1YPR028W 543 nt1.09□□□□□ -2.23
RAD3P06839 COG4YPR105C 2586 nt1.08□□□□□ -2.24
RAD3P06839 VPS54YDR027C 2670 nt1.08□□□□□ -2.24
RAD3P06839 SWI5YDR146C 2130 nt1.08□□□□□ -2.24
RAD3P06839 PAU2YEL049W 363 nt1.08□□□□□ -2.24
RAD3P06839 MXR1YER042W 555 nt1.08□□□□□ -2.24
RAD3P06839 RTR1YER139C 681 nt1.08□□□□□ -2.24
RAD3P06839 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
RAD3P06839 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
RAD3P06839 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
RAD3P06839 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
RAD3P06839 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
RAD3P06839 PAU12YGR294W 363 nt1.08□□□□□ -2.24
RAD3P06839 YNL122CYNL122C 348 nt1.08□□□□□ -2.24
RAD3P06839 YOR192C-CYOR192C-C 237 nt1.08□□□□□ -2.24
RAD3P06839 PAU24YBR301W 363 nt1.08□□□□□ -2.24
RAD3P06839 YOR192C-AYOR192C-A 1317 nt1.08□□□□□ -2.24
RAD3P06839 SWI4YER111C 3282 nt1.07□□□□□ -2.24
RAD3P06839 URM1YIL008W 300 nt1.07□□□□□ -2.24
RAD3P06839 RPL9BYNL067W 576 nt1.07□□□□□ -2.24
RAD3P06839 snR14snR14 160 nt1.07□□□□□ -2.24
RAD3P06839 LOA1YPR139C 903 nt1.07□□□□□ -2.24
RAD3P06839 PXA2YKL188C 2562 nt1.07□□□□□ -2.24
RAD3P06839 ZIP1YDR285W 2628 nt1.07□□□□□ -2.24
RAD3P06839 OST1YJL002C 1431 nt1.06□□□□□ -2.24
RAD3P06839 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
RAD3P06839 RPL16AYIL133C 600 nt1.06□□□□□ -2.24
RAD3P06839 INA22YIR024C 651 nt1.06□□□□□ -2.24
RAD3P06839 YML009C-AYML009C-A 327 nt1.06□□□□□ -2.24
RAD3P06839 RUF22RUF22 515 nt1.06□□□□□ -2.24
RAD3P06839 TOF2YKR010C 2316 nt1.05□□□□□ -2.24
RAD3P06839 GDS1YOR355W 1569 nt1.05□□□□□ -2.24
RAD3P06839 SPO23YBR250W 1572 nt1.05□□□□□ -2.24
RAD3P06839 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
RAD3P06839 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
RAD3P06839 BI2Q0110 1272 nt1.05□□□□□ -2.24
RAD3P06839 TOM22YNL131W 459 nt1.05□□□□□ -2.24
RAD3P06839 NUT1YGL151W 3399 nt1.05□□□□□ -2.24
RAD3P06839 WIP1YDR374W-A 270 nt1.04□□□□□ -2.24
RAD3P06839 PHS1YJL097W 654 nt1.04□□□□□ -2.24
RAD3P06839 YOR032W-AYOR032W-A 201 nt1.04□□□□□ -2.24
RAD3P06839 MKT1YNL085W 2493 nt1.04□□□□□ -2.24
RAD3P06839 NBL1YHR199C-A 222 nt1.03□□□□□ -2.24
RAD3P06839 HIT1YJR055W 495 nt1.03□□□□□ -2.24
RAD3P06839 ATP19YOL077W-A 207 nt1.03□□□□□ -2.24
RAD3P06839 YBR076C-AYBR076C-A 267 nt1.03□□□□□ -2.24
RAD3P06839 ENV11YGR071C 2583 nt1.02□□□□□ -2.25
RAD3P06839 BUD3YCL014W 4911 nt1.02□□□□□ -2.25
RAD3P06839 LYS14YDR034C 2373 nt1.02□□□□□ -2.25
RAD3P06839 YDR182W-AYDR182W-A 204 nt1.02□□□□□ -2.25
RAD3P06839 EAF1YDR359C 2949 nt1.02□□□□□ -2.25
RAD3P06839 YGL239CYGL239C 315 nt1.02□□□□□ -2.25
RAD3P06839 SPT21YMR179W 2277 nt1.02□□□□□ -2.25
RAD3P06839 UBP3YER151C 2739 nt1.01□□□□□ -2.25
RAD3P06839 YHR130CYHR130C 336 nt1.01□□□□□ -2.25
RAD3P06839 UBC7YMR022W 498 nt1.01□□□□□ -2.25
RAD3P06839 YMR153C-AYMR153C-A 336 nt1.01□□□□□ -2.25
RAD3P06839 YOL013W-BYOL013W-B 291 nt1.01□□□□□ -2.25
RAD3P06839 NOC3YLR002C 1992 nt1.01□□□□□ -2.25
RAD3P06839 PIG1YLR273C 1947 nt1.01□□□□□ -2.25
RAD3P06839 STB6YKL072W 2301 nt1□□□□□ -2.25
RAD3P06839 APL3YBL037W 3078 nt1□□□□□ -2.25
RAD3P06839 YIL066W-AYIL066W-A 444 nt1□□□□□ -2.25
RAD3P06839 YMR141W-AYMR141W-A 225 nt1□□□□□ -2.25
RAD3P06839 YMR175W-AYMR175W-A 195 nt1□□□□□ -2.25
RAD3P06839 ZEO1YOL109W 342 nt1□□□□□ -2.25
RAD3P06839 SMC1YFL008W 3678 nt1□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 36.2 ms