RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR029WYJR029W FAP1P53971 965 aa2.51□□□□□ -2.01
YJR029WYJR029W PRY3P47033 881 aa2.35□□□□□ -2.03
YJR029WYJR029W DRS1P32892 752 aaKnown RBP2.17□□□□□ -2.06
YJR029WYJR029W MTC1P47018 478 aaKnown RBP2.16□□□□□ -2.06
YJR029WYJR029W TSR3Q12094 313 aaKnown RBP2.08□□□□□ -2.08
YJR029WYJR029W DCD1P06773 312 aa2.07□□□□□ -2.08
YJR029WYJR029W RPG1P38249 964 aaKnown RBP2□□□□□ -2.09
YJR029WYJR029W YCK3P39962 524 aa2□□□□□ -2.09
YJR029WYJR029W AAD16Q02895 342 aa1.92□□□□□ -2.1
YJR029WYJR029W BFR2Q06631 534 aaKnown RBP1.91□□□□□ -2.1
YJR029WYJR029W PRI1P10363 409 aa1.86□□□□□ -2.11
YJR029WYJR029W HOP09932 586 aa1.86□□□□□ -2.11
YJR029WYJR029W PTP3P40048 928 aa1.84□□□□□ -2.11
YJR029WYJR029W DIP2Q12220 943 aaPredicted RBP1.84□□□□□ -2.11
YJR029WYJR029W RPL17AP05740 184 aaKnown RBP1.84□□□□□ -2.11
YJR029WYJR029W RPL17BP46990 184 aaKnown RBP1.84□□□□□ -2.11
YJR029WYJR029W REB1P21538 810 aa1.83□□□□□ -2.12
YJR029WYJR029W ISW2Q08773 1120 aa1.8□□□□□ -2.12
YJR029WYJR029W CDC27P38042 758 aa1.78□□□□□ -2.13
YJR029WYJR029W MRPL32P25348 183 aa1.77□□□□□ -2.13
YJR029WYJR029W HAA1Q12753 694 aaKnown RBP1.77□□□□□ -2.13
YJR029WYJR029W YAH1Q12184 172 aaKnown RBP1.76□□□□□ -2.13
YJR029WYJR029W PIB1Q06651 286 aa1.76□□□□□ -2.13
YJR029WYJR029W DMA1P38823 416 aa1.75□□□□□ -2.13
YJR029WYJR029W MAP2P38174 421 aaKnown RBP1.73□□□□□ -2.13
YJR029WYJR029W SCY1P53009 804 aa1.72□□□□□ -2.13
YJR029WYJR029W RSE1Q04693 1361 aaKnown RBP1.71□□□□□ -2.14
YJR029WYJR029W WSC3Q12215 556 aa1.65□□□□□ -2.15
YJR029WYJR029W YKR023WP36119 530 aaKnown RBP1.63□□□□□ -2.15
YJR029WYJR029W SCT1P32784 759 aa1.6□□□□□ -2.15
YJR029WYJR029W SPT21P35209 758 aa1.6□□□□□ -2.15
YJR029WYJR029W SIS1P25294 352 aaKnown RBP1.6□□□□□ -2.15
YJR029WYJR029W BCH2P36122 765 aa1.6□□□□□ -2.15
YJR029WYJR029W YGL015CP33199 130 aa1.59□□□□□ -2.16
YJR029WYJR029W YBL029C-AQ3E756 94 aa1.59□□□□□ -2.16
YJR029WYJR029W YFR006WP43590 535 aa1.59□□□□□ -2.16
YJR029WYJR029W NAB3P38996 802 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
YJR029WYJR029W TFA1P36100 482 aa1.57□□□□□ -2.16
YJR029WYJR029W AVT3P36062 692 aa1.56□□□□□ -2.16
YJR029WYJR029W TFC8Q12308 588 aa1.55□□□□□ -2.16
YJR029WYJR029W PSH1Q12161 406 aa1.54□□□□□ -2.16
YJR029WYJR029W YIL055CP40523 627 aaKnown RBP1.53□□□□□ -2.16
YJR029WYJR029W RTT106P40161 455 aa1.53□□□□□ -2.16
YJR029WYJR029W FPR3P38911 411 aaKnown RBP1.53□□□□□ -2.17
YJR029WYJR029W DMA2P53924 522 aa1.53□□□□□ -2.17
YJR029WYJR029W SLX5P32828 619 aaKnown RBP1.52□□□□□ -2.17
YJR029WYJR029W FPR4Q06205 392 aaPredicted RBP1.52□□□□□ -2.17
YJR029WYJR029W OXP1P28273 1286 aa1.52□□□□□ -2.17
YJR029WYJR029W RCR1P38212 213 aa1.52□□□□□ -2.17
YJR029WYJR029W BDF1P35817 686 aa1.51□□□□□ -2.17
YJR029WYJR029W EPS1P40557 701 aa1.5□□□□□ -2.17
YJR029WYJR029W MRM1P25270 412 aa1.5□□□□□ -2.17
YJR029WYJR029W AIM44Q99299 758 aa1.5□□□□□ -2.17
YJR029WYJR029W CST9Q06032 482 aa1.49□□□□□ -2.17
YJR029WYJR029W URN1Q06525 465 aaKnown RBP1.48□□□□□ -2.17
YJR029WYJR029W ENP1P38333 483 aaKnown RBP1.48□□□□□ -2.17
YJR029WYJR029W SET4P42948 560 aa1.48□□□□□ -2.17
YJR029WYJR029W SAS10Q12136 610 aaPredicted RBP1.47□□□□□ -2.17
YJR029WYJR029W YDR344CQ05510 147 aa1.46□□□□□ -2.17
YJR029WYJR029W BUD31P25337 157 aaPredicted RBP1.46□□□□□ -2.18
YJR029WYJR029W MNN4P36044 1178 aa1.46□□□□□ -2.18
YJR029WYJR029W MAM1P40065 302 aa1.46□□□□□ -2.18
YJR029WYJR029W AI2P03876 854 aa1.45□□□□□ -2.18
YJR029WYJR029W NSR1P27476 414 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
YJR029WYJR029W NOP53Q12080 455 aaKnown RBP1.44□□□□□ -2.18
YJR029WYJR029W ABP1P15891 592 aaKnown RBP1.43□□□□□ -2.18
YJR029WYJR029W POL5P39985 1022 aaKnown RBP1.43□□□□□ -2.18
YJR029WYJR029W RAD26P40352 1085 aa1.43□□□□□ -2.18
YJR029WYJR029W SPP1Q03012 353 aa1.42□□□□□ -2.18
YJR029WYJR029W YLR271WQ06152 274 aa1.42□□□□□ -2.18
YJR029WYJR029W GTT3P39996 337 aa1.41□□□□□ -2.18
YJR029WYJR029W RPP2AP05319 106 aaKnown RBP1.41□□□□□ -2.18
YJR029WYJR029W SIC1P38634 284 aa1.41□□□□□ -2.18
YJR029WYJR029W TIF4632P39936 914 aaKnown RBP1.4□□□□□ -2.18
YJR029WYJR029W HIF1Q12373 385 aa1.4□□□□□ -2.18
YJR029WYJR029W RPC31P17890 251 aa1.4□□□□□ -2.19
YJR029WYJR029W BUD21Q08492 214 aaPredicted RBP1.4□□□□□ -2.19
YJR029WYJR029W DCW1P36091 449 aa1.4□□□□□ -2.19
YJR029WYJR029W RED1P14291 827 aa1.4□□□□□ -2.19
YJR029WYJR029W MIF2P35201 549 aa1.4□□□□□ -2.19
YJR029WYJR029W DBP1P24784 617 aaKnown RBP1.39□□□□□ -2.19
YJR029WYJR029W RSM7P47150 247 aa1.39□□□□□ -2.19
YJR029WYJR029W ITT1Q04638 464 aa1.39□□□□□ -2.19
YJR029WYJR029W RLF2Q12495 606 aa1.39□□□□□ -2.19
YJR029WYJR029W SUP35P05453 685 aaKnown RBP1.38□□□□□ -2.19
YJR029WYJR029W SPB4P25808 606 aaPredicted RBP1.38□□□□□ -2.19
YJR029WYJR029W NOG1Q02892 647 aaKnown RBP1.38□□□□□ -2.19
YJR029WYJR029W CPA2P03965 1118 aaKnown RBP1.38□□□□□ -2.19
YJR029WYJR029W VPS70P47161 811 aa1.38□□□□□ -2.19
YJR029WYJR029W LDB19Q12502 818 aa1.38□□□□□ -2.19
YJR029WYJR029W EAP1P36041 632 aaKnown RBP1.37□□□□□ -2.19
YJR029WYJR029W YJL171CP46992 396 aa1.37□□□□□ -2.19
YJR029WYJR029W BIO2P32451 375 aa1.37□□□□□ -2.19
YJR029WYJR029W SAP30P38429 201 aa1.37□□□□□ -2.19
YJR029WYJR029W EAF7P53911 425 aaKnown RBP1.37□□□□□ -2.19
YJR029WYJR029W RKM4Q12504 494 aa1.37□□□□□ -2.19
YJR029WYJR029W ASF1P32447 279 aa1.37□□□□□ -2.19
YJR029WYJR029W MID1P41821 548 aa1.37□□□□□ -2.19
YJR029WYJR029W RIM101P33400 625 aa1.37□□□□□ -2.19
YJR029WYJR029W ERG12P07277 443 aa1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms