Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDRBS3O75525 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 MIR6821-201ENST00000617625 74 ntBASIC18.14■□□□□ 0.49
KHDRBS3O75525 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 MYCNOS-205ENST00000641950 531 ntBASIC18.14■□□□□ 0.49
KHDRBS3O75525 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDRBS3O75525 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDRBS3O75525 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDRBS3O75525 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDRBS3O75525 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDRBS3O75525 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KHDRBS3O75525 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 CDV3P1-201ENST00000471403 739 ntBASIC18.13■□□□□ 0.49
KHDRBS3O75525 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.13■□□□□ 0.49
KHDRBS3O75525 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDRBS3O75525 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KHDRBS3O75525 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDRBS3O75525 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.11■□□□□ 0.49
KHDRBS3O75525 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
KHDRBS3O75525 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 AFG3L1P-217ENST00000557444 2447 ntBASIC18.11■□□□□ 0.49
KHDRBS3O75525 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KHDRBS3O75525 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KHDRBS3O75525 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KHDRBS3O75525 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.1■□□□□ 0.49
KHDRBS3O75525 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.1■□□□□ 0.49
KHDRBS3O75525 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.1■□□□□ 0.49
KHDRBS3O75525 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KHDRBS3O75525 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.1■□□□□ 0.49
KHDRBS3O75525 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.1■□□□□ 0.49
KHDRBS3O75525 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KHDRBS3O75525 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms