Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AP005242.2-201ENST00000580065 1175 ntBASIC19.42■□□□□ 0.7
CNOT1A5YKK6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 CR392000.1-201ENST00000624770 1228 ntBASIC19.42■□□□□ 0.7
CNOT1A5YKK6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 AC004263.2-201ENST00000617183 678 ntBASIC19.41■□□□□ 0.7
CNOT1A5YKK6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT1A5YKK6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.4■□□□□ 0.7
CNOT1A5YKK6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 TSPY14P-201ENST00000303979 915 ntBASIC19.4■□□□□ 0.7
CNOT1A5YKK6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 AC010203.1-204ENST00000548782 407 ntBASIC19.4■□□□□ 0.7
CNOT1A5YKK6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT1A5YKK6 AL445675.2-201ENST00000620291 557 ntBASIC19.4■□□□□ 0.7
CNOT1A5YKK6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CNOT1A5YKK6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.39■□□□□ 0.7
CNOT1A5YKK6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 HMGA1P5-201ENST00000412453 271 ntBASIC19.39■□□□□ 0.69
CNOT1A5YKK6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.39■□□□□ 0.69
CNOT1A5YKK6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 AC011506.1-201ENST00000474329 610 ntBASIC19.39■□□□□ 0.69
CNOT1A5YKK6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.39■□□□□ 0.69
CNOT1A5YKK6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT1A5YKK6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.37■□□□□ 0.69
CNOT1A5YKK6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms