Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC27.55■■■□□ 2
SBNO1A3KN83 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SBNO1A3KN83 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC27.54■■■□□ 2
SBNO1A3KN83 AC004264.1-201ENST00000608354 794 ntBASIC27.54■■■□□ 2
SBNO1A3KN83 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC27.54■■■□□ 2
SBNO1A3KN83 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.54■■■□□ 2
SBNO1A3KN83 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
SBNO1A3KN83 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC27.54■■■□□ 2
SBNO1A3KN83 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SBNO1A3KN83 KRT18P22-201ENST00000402024 1347 ntBASIC27.54■■■□□ 2
SBNO1A3KN83 STK25-205ENST00000405883 1904 ntTSL 2 BASIC27.53■■■□□ 2
SBNO1A3KN83 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC27.53■■■□□ 2
SBNO1A3KN83 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SBNO1A3KN83 AL390955.1-201ENST00000428694 934 ntBASIC27.53■■■□□ 2
SBNO1A3KN83 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC27.53■■■□□ 2
SBNO1A3KN83 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC27.53■■■□□ 2
SBNO1A3KN83 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.53■■■□□ 2
SBNO1A3KN83 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC27.52■■■□□ 2
SBNO1A3KN83 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SBNO1A3KN83 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC27.52■■■□□ 2
SBNO1A3KN83 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC27.52■■■□□ 2
SBNO1A3KN83 PNN-205ENST00000556530 601 ntTSL 2 BASIC27.52■■■□□ 2
SBNO1A3KN83 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
SBNO1A3KN83 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC27.52■■■□□ 2
SBNO1A3KN83 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
SBNO1A3KN83 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SBNO1A3KN83 TUB-203ENST00000534099 1759 ntTSL 2 BASIC27.52■■■□□ 2
SBNO1A3KN83 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
SBNO1A3KN83 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
SBNO1A3KN83 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
SBNO1A3KN83 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SBNO1A3KN83 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SBNO1A3KN83 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC27.51■■□□□ 1.99
SBNO1A3KN83 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
SBNO1A3KN83 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SBNO1A3KN83 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SBNO1A3KN83 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SBNO1A3KN83 NIFKP9-201ENST00000419265 221 ntBASIC27.51■■□□□ 1.99
SBNO1A3KN83 DUX4L26-201ENST00000489078 1255 ntBASIC27.51■■□□□ 1.99
SBNO1A3KN83 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC27.51■■□□□ 1.99
SBNO1A3KN83 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC27.51■■□□□ 1.99
SBNO1A3KN83 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC27.51■■□□□ 1.99
SBNO1A3KN83 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SBNO1A3KN83 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SBNO1A3KN83 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SBNO1A3KN83 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SBNO1A3KN83 AL137013.1-201ENST00000432946 1228 ntBASIC27.5■■□□□ 1.99
SBNO1A3KN83 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC27.5■■□□□ 1.99
SBNO1A3KN83 CFL2-205ENST00000555765 632 ntTSL 2 BASIC27.5■■□□□ 1.99
SBNO1A3KN83 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC27.5■■□□□ 1.99
SBNO1A3KN83 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC27.5■■□□□ 1.99
SBNO1A3KN83 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SBNO1A3KN83 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SBNO1A3KN83 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SBNO1A3KN83 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC27.5■■□□□ 1.99
SBNO1A3KN83 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SBNO1A3KN83 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
SBNO1A3KN83 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 KSR1P1-201ENST00000446298 240 ntBASIC27.48■■□□□ 1.99
SBNO1A3KN83 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SBNO1A3KN83 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SBNO1A3KN83 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SBNO1A3KN83 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SBNO1A3KN83 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SBNO1A3KN83 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC27.48■■□□□ 1.99
SBNO1A3KN83 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms